豚鼠胚胎植入前发育的单细胞分析。
Single-cell analysis of preimplantation embryonic development in guinea pigs.
机构信息
School of Life Sciences, University of Science and Technology of China, Hefei, 230026, China.
Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangdong-Hong Kong Joint Laboratory for Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, 510530, China.
出版信息
BMC Genomics. 2024 Sep 30;25(1):911. doi: 10.1186/s12864-024-10815-z.
BACKGROUND
Guinea pigs exhibit numerous physiological similarities to humans, yet the details of their preimplantation embryonic development remain largely unexplored.
RESULTS
To address this, we conducted single-cell sequencing on the transcriptomes of cells isolated from the zygote stage through preimplantation stages in guinea pigs. This study identified seven distinct cell types within guinea pig preimplantation embryos and pinpointed the timing of zygotic gene activation (ZGA). Trajectory analysis revealed a bifurcation into two lineage-specific branches, accompanied by alterations in specific pathways, including oxidative phosphorylation and vascular endothelial growth factor (VEGF). Additionally, co-expressed gene network analysis highlighted the most enriched functional modules for the epiblast (EPI), primitive endoderm (PrE), and inner cell mass (ICM). Finally, we compared the similarities and differences between human and guinea pig epiblasts (EPIs).
CONCLUSION
This study systematically constructs a cell atlas of guinea pig preimplantation embryonic development, offering fresh insights into mammalian embryonic development and providing alternative experimental models for studying human embryonic development.
背景
豚鼠表现出许多与人类相似的生理特征,但它们的胚胎发育过程在很大程度上仍未被探索。
结果
为了解决这个问题,我们对豚鼠从受精卵阶段到着床前阶段分离出的细胞的转录组进行了单细胞测序。这项研究在豚鼠着床前胚胎中鉴定出了 7 种不同的细胞类型,并确定了合子基因激活(ZGA)的时间。轨迹分析显示,细胞分为两个谱系特异性分支,伴随着特定途径的改变,包括氧化磷酸化和血管内皮生长因子(VEGF)。此外,共表达基因网络分析突出了最丰富的上皮(EPI)、原始内胚层(PrE)和内细胞团(ICM)功能模块。最后,我们比较了人类和豚鼠上皮(EPIs)之间的相似性和差异。
结论
这项研究系统地构建了豚鼠着床前胚胎发育的细胞图谱,为哺乳动物胚胎发育提供了新的见解,并为研究人类胚胎发育提供了替代的实验模型。