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气相中硫代尿嘧啶的X射线光电子能谱和近边X射线吸收精细结构光谱

X-ray photoelectron and NEXAFS spectroscopy of thionated uracils in the gas phase.

作者信息

Mayer Dennis, Handrich Max, Picconi David, Lever Fabiano, Mehner Lisa, Murillo-Sanchez Marta L, Walz Constantin, Titov Evgenii, Bozek John, Saalfrank Peter, Gühr Markus

机构信息

Deutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607 Hamburg, Germany.

Institut für Chemie, Universität Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany.

出版信息

J Chem Phys. 2024 Oct 7;161(13). doi: 10.1063/5.0226983.

DOI:10.1063/5.0226983
PMID:39351936
Abstract

We present a comprehensive, combined experimental and theoretical study of the core-level photoelectron and near-edge x-ray absorption fine structure (NEXAFS) spectra of 2-thiouracil, 4-thiouracil, and 2,4-dithiouracil at the oxygen 1s, nitrogen 1s, carbon 1s, and the sulfur 2s and 2p edges. X-ray photoelectron spectra were calculated using equation-of-motion coupled-cluster theory (EOM-CCSD), and NEXAFS spectra were calculated using algebraic diagrammatic construction and EOM-CCSD. For the main peaks at O and N 1s as well as the S 2s edge, we find a single photoline. The S 2p spectra show a spin-orbit splitting of 1.2 eV with an asymmetric vibrational line shape. We also resolve the correlation satellites of these photolines. For the carbon 1s photoelectrons, we observe a splitting on the eV scale, which we can unanimously attribute to specific sites. In the NEXAFS spectra, we see very isolated pre-edge features at the oxygen 1s edge; the nitrogen edge, however, is very complex, in contrast to the XPS findings. The C 1s edge NEXAFS spectrum shows site-specific splitting. The sulfur 2s and 2p spectra are dominated by two strong pre-edge transitions. The S 2p spectra show again the spin-orbit splitting of 1.2 eV.

摘要

我们对2-硫尿嘧啶、4-硫尿嘧啶和2,4-二硫尿嘧啶在氧1s、氮1s、碳1s以及硫2s和2p边缘的芯能级光电子能谱和近边X射线吸收精细结构(NEXAFS)光谱进行了全面的实验与理论相结合的研究。使用运动方程耦合簇理论(EOM-CCSD)计算X射线光电子能谱,使用代数图示构建法和EOM-CCSD计算NEXAFS光谱。对于O和N 1s以及S 2s边缘的主峰,我们发现了单一的光电子线。S 2p光谱显示出1.2 eV的自旋轨道分裂,具有不对称的振动线形。我们还解析了这些光电子线的相关卫星峰。对于碳1s光电子,我们观察到在eV尺度上的分裂,我们一致将其归因于特定的位点。在NEXAFS光谱中,我们在氧1s边缘看到非常孤立的预边特征;然而,与XPS结果相反,氮边缘非常复杂。C 1s边缘NEXAFS光谱显示出位点特异性分裂。硫2s和2p光谱由两个强预边跃迁主导。S 2p光谱再次显示出1.2 eV的自旋轨道分裂。

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引用本文的文献

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Dissociative Photoionization of 2-Thiouracil and 4-Thiouracil: A Molecular Dynamics Study.2-硫尿嘧啶和4-硫尿嘧啶的离解光致电离:一项分子动力学研究
J Phys Chem A. 2025 Aug 14;129(32):7352-7364. doi: 10.1021/acs.jpca.5c03342. Epub 2025 Jul 31.
2
Direct Observation of the to Transition in 2-Thiouracil via Time-Resolved NEXAFS Spectroscopy.通过时间分辨近边X射线吸收精细结构光谱对2-硫尿嘧啶中π到π*跃迁的直接观测。
J Phys Chem Lett. 2025 Apr 24;16(16):4038-4046. doi: 10.1021/acs.jpclett.5c00544. Epub 2025 Apr 15.