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优化基于噬菌体的突变体回收并最小化金黄色葡萄球菌中转座子文库构建中的热效应。

Optimizing phage-based mutant recovery and minimizing heat effect in the construction of transposon libraries in Staphylococcus aureus.

机构信息

Department of Biomedical Sciences, University of Sassari, Sassari, 07100, Italy.

出版信息

Sci Rep. 2024 Oct 1;14(1):22831. doi: 10.1038/s41598-024-73731-y.

Abstract

Staphylococcus aureus (S. aureus), particularly Methicillin-resistant S. aureus (MRSA), poses a significant global public health threat, necessitating advanced methodologies to enhance our understanding of this organism at the omics levels. This study introduces a refined protocol for constructing and curing high-density transposon mutant (tn-mutant) libraries in S. aureus, addressing the challenges associated with low transductant yields, and the complex genetic manipulation mechanism in Gram-positive bacteria. Our methodology employs a Himar1 transposon based on a two-plasmid system, leveraging Himar1's high insertional efficiency in AT-rich organisms. Enhanced transduction efficiency was achieved through chloramphenicol pre-treatment and the use of modified enriched media. Complementing this, an optimized plasmid curing procedure ensured a representative and stable tn-mutant library. The protocol was successfully applied to multiple S. aureus strains, demonstrating an increase in mutant recovery and reduced post-curing impact. The method offers a robust approach for Transposon Insertion Sequencing (TIS) applications in S. aureus, enabling deeper insights into survival, resistance, and pathogenicity mechanisms. This protocol holds a significant potential for accelerating the construction of tn-mutant libraries in various S. aureus strains.

摘要

金黄色葡萄球菌(S. aureus),特别是耐甲氧西林金黄色葡萄球菌(MRSA),对全球公共健康构成重大威胁,需要先进的方法学来增强我们在组学水平上对该生物的理解。本研究介绍了一种改良的金黄色葡萄球菌高密度转座子突变(tn-mutant)文库构建和修复的方案,解决了转导效率低和革兰氏阳性菌复杂遗传操作机制的问题。我们的方法学采用了基于双质粒系统的 Himar1 转座子,利用 Himar1 在富含 AT 的生物中的高效插入效率。通过氯霉素预处理和使用改良的富集培养基,提高了转导效率。此外,优化的质粒修复程序确保了 tn-mutant 文库具有代表性和稳定性。该方案已成功应用于多种金黄色葡萄球菌菌株,显示出突变体回收的增加和修复后影响的降低。该方法为金黄色葡萄球菌中的转座子插入测序(TIS)应用提供了一种强大的方法,使我们能够更深入地了解生存、抗性和致病性机制。该方案有望加速各种金黄色葡萄球菌菌株的 tn-mutant 文库的构建。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43aa/11445466/c91375eff9ed/41598_2024_73731_Fig1_HTML.jpg

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