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肥厚型心肌病中自噬相关基因的鉴定与验证

Identification and validation of autophagy‑related genes in hypertrophic cardiomyopathy.

作者信息

Qiu Rong-Bin, Zhao Shi-Tao, Li Zhi-Wei, Zeng Rui-Yuan, Qiu Zhi-Cong, Peng Han-Zhi, Xu Zhi-Qiang, Zhou Lian-Fen, Lai Song-Qing, Wan Li

机构信息

Department of Cardiovascular Surgery, The First Affiliated Hospital, Nanchang University, Nanchang, Jiangxi 330006, P.R. China.

Institute of Cardiovascular Surgical Diseases, Jiangxi Academy of Clinical Medical Sciences, The First Affiliated Hospital of Nanchang University, Nanchang, Jiangxi 330006, P.R. China.

出版信息

Exp Ther Med. 2024 Sep 25;28(6):440. doi: 10.3892/etm.2024.12729. eCollection 2024 Dec.

DOI:10.3892/etm.2024.12729
PMID:39355520
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11443588/
Abstract

Hypertrophic cardiomyopathy (HCM) is an autosomal dominant cardiac disorder characterized by ventricular hypertrophy resulting from the disordered arrangement of myocardial cells, which leads to impaired cardiac function or death. Autophagy (AT) is a biochemical process through which lysosomes degrade and recycle damaged or discarded intracellular components to protect cells against external environmental conditions, such as hypoxia and oxidative stress. AT is closely related to HCM, and thus, serves an important role in myocardial hypertrophy. However, the precise mechanism underlying the regulation of AT in cardiac hypertrophy remains elusive. The present study aimed to examine the role and mechanisms of AT-related genes (ARGs) in HCM through bioinformatics analysis and experimental validation and to identify potential targeted drugs for HCM. In this study, cardiac samples were obtained from healthy individuals and patients with HCM from the GEO database, and screened for differentially expressed ARGs to further investigate their potential interactions and functional pathways. These genes were subjected to functional enrichment analysis to identify potential crosstalk and involved pathways. Based on a protein-protein interaction network, EIF4EBP1, MCL1, PIK3R1, CCND1 and PPARG were identified as potential biomarkers for the diagnosis and treatment of HCM. Furthermore, 10 components with therapeutic potential for HCM were predicted based on the aforementioned hub genes. The results of bioinformatics analysis were validated using H9c2 cells stimulated with angiotensin II, which represented an model of cardiac hypertrophy. Overall, the present study demonstrated that the expression levels of ARGs were substantially altered in HCM. Therefore, these genes may be used as diagnostic biomarkers and therapeutic targets for HCM.

摘要

肥厚型心肌病(HCM)是一种常染色体显性遗传性心脏疾病,其特征是心肌细胞排列紊乱导致心室肥厚,进而导致心脏功能受损或死亡。自噬(AT)是一种生物化学过程,通过该过程溶酶体降解并回收受损或废弃的细胞内成分,以保护细胞免受低氧和氧化应激等外部环境条件的影响。自噬与肥厚型心肌病密切相关,因此在心肌肥厚中起重要作用。然而,心脏肥厚中自噬调节的确切机制仍不清楚。本研究旨在通过生物信息学分析和实验验证来研究自噬相关基因(ARGs)在肥厚型心肌病中的作用和机制,并确定肥厚型心肌病的潜在靶向药物。在本研究中,从GEO数据库中获取健康个体和肥厚型心肌病患者的心脏样本,筛选差异表达的自噬相关基因,以进一步研究它们的潜在相互作用和功能途径。对这些基因进行功能富集分析,以确定潜在的相互作用和涉及的途径。基于蛋白质-蛋白质相互作用网络,鉴定出真核起始因子4E结合蛋白1(EIF4EBP1)、髓细胞白血病序列1(MCL1)、磷脂酰肌醇-3激酶调节亚基1(PIK3R1)、细胞周期蛋白D1(CCND1)和过氧化物酶体增殖物激活受体γ(PPARG)作为肥厚型心肌病诊断和治疗的潜在生物标志物。此外,基于上述核心基因预测了10种对肥厚型心肌病具有治疗潜力的成分。使用血管紧张素II刺激的H9c2细胞(代表心脏肥厚模型)对生物信息学分析结果进行了验证。总体而言,本研究表明,自噬相关基因的表达水平在肥厚型心肌病中发生了显著改变。因此,这些基因可用作肥厚型心肌病的诊断生物标志物和治疗靶点。

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本文引用的文献

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Targeting MCL1-driven anti-apoptotic pathways overcomes blast progression after hypomethylating agent failure in chronic myelomonocytic leukemia.针对 MCL1 驱动的抗凋亡途径可克服低甲基化剂治疗失败后慢性粒单核细胞白血病中的原始细胞进展。
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Autophagy cooperates with PDGFRA to support oncogenic growth signaling.自噬与 PDGFRA 合作支持致癌生长信号。
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Targeting Metabolic Dependencies Fueling the TCA Cycle to Circumvent Therapy Resistance in Acute Myeloid Leukemia.靶向代谢依赖性以规避急性髓系白血病的治疗抵抗。
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Structural and Dynamic Analyses of Pathogenic Variants in Reveal a Shared Mechanism Associated among Cancer, Undergrowth, and Overgrowth Syndromes.[具体基因名称]致病变异的结构与动态分析揭示了癌症、生长发育不良和过度生长综合征之间的共同关联机制。 (需补充完整基因名称,原英文题目中“in”后面缺少具体内容)
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Role of Genetics in Diagnosis and Management of Hypertrophic Cardiomyopathy: A Glimpse into the Future.遗传学在肥厚型心肌病诊断与管理中的作用:展望未来
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