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研究红树林对沉积物中古菌产甲烷作用的年龄相关影响:群落组装和共存模式。

Stand age-related effects of mangrove on archaeal methanogenesis in sediments: Community assembly and co-occurrence patterns.

机构信息

Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan 316021, Zhejiang, China; Donghai Laboratory, Zhoushan 316021, Zhejiang, China.

Institute of Marine Biology and Pharmacology, Ocean College, Zhejiang University, Zhoushan 316021, Zhejiang, China.

出版信息

Sci Total Environ. 2024 Dec 1;954:176596. doi: 10.1016/j.scitotenv.2024.176596. Epub 2024 Sep 30.

Abstract

Mangrove sediment is a key source of methane emissions; however, archaea community structure dynamics and methanogenesis activities during long-term mangrove restoration remain unclear. In this study, microcosm incubations revealed a substantial reduction in microbial-mediated methane production potential from mangrove sediments with increasing stand age; methane production rates decreased from 0.42 ng g d in 6-year-old stands to 0.23 ng g d in 64-year-old stands. High-throughput sequencing revealed a reduction in community diversity because of specific microorganism colonization and species loss, notably a decline in the relative abundance of Bathyarchaeia in sediments of 64-year-old stands. In addition, mangrove sediments, especially those in older stands (20- and 64-year-old), had more complex and stable co-occurrence microbial networks than mudflats. Furthermore, archaea community assembly in older stands was dominated by stochastic processes wherein dispersal limitation was prominent, and that in younger stands (6- and 12-year-old) was driven by deterministic processes. The proportion of dispersal limitation of Bathyarchaeia and traditional methanogens in sediment decreased with an increase in stand age. Quantitative polymerase chain reaction analysis confirmed a decrease in Bathyarchaeia (from 3.50 to 0.54 copies g) and mcrA gene (from 3.83 to 0.25 copies g) abundance in mangrove sediments with an increase in stand age. These findings demonstrate the critical role of Bathyarchaeia in methanogenesis; the decline in microbial interactions and abundance, and the reduced proportion of dispersal limitation of Bathyarchaeia and traditional methanogens collectively contributed to the mitigation of microbial-mediated methane production potential in older mangrove stands.

摘要

红树林沉积物是甲烷排放的重要来源;然而,长期红树林恢复过程中,古菌群落结构动态和产甲烷活性仍不清楚。本研究通过微宇宙培养实验表明,随着林龄的增加,微生物介导的甲烷产生潜力从红树林沉积物中大量减少;甲烷产生速率从 6 年生林分的 0.42ng g d 降低到 64 年生林分的 0.23ng g d。高通量测序揭示了由于特定微生物的定殖和物种丧失导致群落多样性降低,特别是 64 年生林分沉积物中 Bathyarchaeia 的相对丰度下降。此外,与泥滩相比,红树林沉积物,特别是较老林分(20 年和 64 年)的沉积物具有更复杂和稳定的共现微生物网络。此外,较老林分(20 年和 64 年)中,古菌群落组装主要受扩散限制主导,而较年轻林分(6 年和 12 年)中,群落组装主要受确定性过程驱动。随着林龄的增加,沉积物中 Bathyarchaeia 和传统产甲烷菌的扩散限制比例降低。定量聚合酶链反应分析证实,随着林龄的增加,红树林沉积物中 Bathyarchaeia(从 3.50 拷贝 g 减少到 0.54 拷贝 g)和 mcrA 基因(从 3.83 拷贝 g 减少到 0.25 拷贝 g)丰度降低。这些发现表明 Bathyarchaeia 在产甲烷过程中起关键作用;微生物相互作用和丰度的下降,以及 Bathyarchaeia 和传统产甲烷菌扩散限制比例的降低,共同导致了较老红树林林分中微生物介导的甲烷产生潜力的缓解。

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