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呼吸道病毒行为:基于实验室的流行病学监测结果。

Respiratory virus behavior: Results of laboratory-based epidemiological surveillance.

机构信息

Instituto Mexicano del Seguro Social, Coordinación de Calidad de Insumos y Laboratorios Especializados, México, México.

Instituto Mexicano del Seguro Social, Coordinación de Vigilancia Epidemiológica, México, México.

出版信息

PLoS One. 2024 Oct 3;19(10):e0307322. doi: 10.1371/journal.pone.0307322. eCollection 2024.

DOI:10.1371/journal.pone.0307322
PMID:39361667
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11449343/
Abstract

BACKGROUND

Respiratory viruses have clinical and epidemiological importance. With the COVID-19 pandemic, interest has focused on SARS-CoV-2, but as a result, the number of samples available for the differential diagnosis of other respiratory viruses has increased.

STUDY DESIGN

Cross-sectional study.

OBJECTIVE

To describe the epidemiological behavior of respiratory viruses based on a laboratory-based epidemiological surveillance system using data from 2017 to 2023.

METHODS

Univariate, bivariate and multivariate analyses of data from a laboratory database of respiratory viruses detected by multiplex RT‒qPCR were performed.

RESULTS

A total of 4,632 samples with positive results for at least 1 respiratory virus, not including influenza or SARS-CoV-2, were analyzed. The most common virus detected was respiratory syncytial virus in 1,467 (26.3%) samples, followed by rhinovirus in 1,384 (24.8%) samples. Most of the samples were from children under 5 years of age. The age-adjusted odds ratio (OR) of death for patients infected with parainfluenza virus 4 was 4.1 (95% confidence interval [95% CI] 2.0-8.2).

CONCLUSION

Respiratory syncytial virus and rhinovirus had the highest frequency and proportion of coinfections, whereas parainfluenza virus 4 was associated with an increased risk of death.

摘要

背景

呼吸道病毒具有临床和流行病学意义。随着 COVID-19 大流行,人们对 SARS-CoV-2 的关注度有所提高,但结果是,可用于其他呼吸道病毒鉴别诊断的样本数量增加了。

研究设计

横断面研究。

目的

基于使用 2017 年至 2023 年数据的基于实验室的流行病学监测系统,描述呼吸道病毒的流行病学行为。

方法

对多重 RT-qPCR 检测到的呼吸道病毒实验室数据库中的数据进行单变量、双变量和多变量分析。

结果

共分析了 4632 份至少检测到 1 种呼吸道病毒(不包括流感或 SARS-CoV-2)的阳性样本。最常见的病毒是呼吸道合胞病毒,在 1467 份样本(26.3%)中检测到,其次是鼻病毒,在 1384 份样本(24.8%)中检测到。大多数样本来自 5 岁以下儿童。感染副流感病毒 4 的患者死亡的年龄调整比值比(OR)为 4.1(95%置信区间 [95%CI] 2.0-8.2)。

结论

呼吸道合胞病毒和鼻病毒的频率和合并感染比例最高,而副流感病毒 4 与死亡风险增加相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0914/11449343/c3ac81eb1188/pone.0307322.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0914/11449343/ef75d189877e/pone.0307322.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0914/11449343/c3ac81eb1188/pone.0307322.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0914/11449343/ef75d189877e/pone.0307322.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0914/11449343/c3ac81eb1188/pone.0307322.g002.jpg

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Epidemiological surveillance of respiratory viral infections in SARS-CoV-2-negative samples during COVID-19 pandemic in Iran.伊朗 COVID-19 大流行期间 SARS-CoV-2 阴性样本中呼吸道病毒感染的流行病学监测。
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Prospective surveillance of human adenovirus in acute respiratory infections reveals epidemiological features and the disappearance of species B during the COVID-19 pandemic in Beijing, China.
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