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北泽碱生物合成的体外特性揭示了一种双功能P450脱羧酶和一种易受非酶促硫醇加成影响的乙烯基β-咔啉中间体。

In Vitro Characterization of Kitasetaline Biosynthesis Reveals a Bifunctional P450 Decarboxylase and a Vinyl β-Carboline Intermediate Susceptible to Nonenzymatic Thiol Addition.

作者信息

Zheng Ziyang, Choi Heewon, Liu Hung-Wen

机构信息

Department of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.

Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, University of Texas at Austin, Austin, Texas 78712, United States.

出版信息

J Am Chem Soc. 2024 Oct 3. doi: 10.1021/jacs.4c11552.

Abstract

Kitasetaline is one of the very few β-carbolines isolated from bacteria. It features a unique -acetylcysteine moiety linked to the β-carboline core through a thioether bond. While earlier experiments identified the gene cluster and reported several putative biosynthetic intermediates, how the C-S bond linkage is constructed has remained elusive. Herein, reconstitution of kitasetaline biosynthesis reveals the involvement of a Pictet-Spenglerase (KslB) and a promiscuous dehydrogenase (KslA) that generate the characteristic β-carboline ring system. In addition, the P450 enzyme KslC was found to catalyze oxidative decarboxylation of 1-(2-carboxyethyl)-9-pyrido[3,4-]indole-3-carboxylic acid to yield the biosynthetic intermediate 1-vinyl-9-pyrido[3,4-]indole-3-carboxylic acid. KslC is also capable of catalyzing further oxidation of its product to yield an -hydroxylated side product. Importantly, the vinyl intermediate was found to undergo nonenzymatic nucleophilic addition by -acetyl-l-cysteine to generate the C-S bond leading directly to kitasetaline without the involvement of a mycothiolated intermediate proposed in a previous biosynthetic model. Thus, this work not only demonstrates that biosynthesis of β-carboline compounds is rich in unexpected chemistry but also adds to the growing realization that biological thiolation reactions are often nonenzymatic in nature, relying instead on enzymatic formation of reactive electrophiles.

摘要

北里碱是从细菌中分离出的极少数β-咔啉之一。它具有一个独特的乙酰半胱氨酸部分,通过硫醚键与β-咔啉核心相连。虽然早期实验确定了基因簇并报道了几种假定的生物合成中间体,但C-S键是如何构建的仍然不清楚。在此,北里碱生物合成的重建揭示了一种Pictet-Spengler酶(KslB)和一种混杂脱氢酶(KslA)的参与,它们生成了特征性的β-咔啉环系统。此外,发现P450酶KslC催化1-(2-羧乙基)-9-吡啶并[3,4-]吲哚-3-羧酸的氧化脱羧反应,生成生物合成中间体1-乙烯基-9-吡啶并[3,4-]吲哚-3-羧酸。KslC还能够催化其产物的进一步氧化,生成一种α-羟基化副产物。重要的是,发现乙烯基中间体通过乙酰-L-半胱氨酸进行非酶亲核加成,生成直接通向北里碱的C-S键,而无需先前生物合成模型中提出的硫醇化中间体的参与。因此,这项工作不仅证明了β-咔啉化合物的生物合成富含意想不到的化学过程,而且还进一步表明,生物硫醇化反应本质上通常是非酶促的,而是依赖于活性亲电试剂的酶促形成。

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