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鉴定千屈菜科蓝花楹中的 bHLH 转录因子和筛选花青苷相关基因。

Identification of bHLH transcription factors and screening of anthocyanin-related genes in Lagerstroemia indica.

机构信息

College of Landscape and Architecture, Zhejiang A & F University, Hangzhou, 311300, China.

Zhejiang Provincial Key Laboratory of Germplasm Innovation and Utilization for Garden Plants, Zhejiang A & F University, Hangzhou, 311300, China.

出版信息

Genetica. 2024 Dec;152(4-6):179-197. doi: 10.1007/s10709-024-00215-2. Epub 2024 Oct 4.

Abstract

The basic helix-loop-helix (bHLH) family is one of the three major transcription factor families that play important transcriptional regulatory roles in plant growth and development. One of the most crucial elements in defining Lagerstroemia indica's decorative qualities is flower color. However, the function of the bHLH transcription factor family in L. indica anthocyanin glycoside synthesis has not been clarified. Using the transcriptome data of flower color, 79 LibHLH genes were found in this study. Phylogenetic analysis showed that the LibHLH genes can be divided into 16 subfamilies, and most of the genes in the same subfamily have similar conserved motifs. The total anthocyanin glycoside content of L. indica 'Zihua Guifei' petals was determined during three developmental stages of the petals' growth. The results showed that the total anthocyanin glycoside content grew gradually with growth and development, and that it accumulated most during the full bloom stage. By using gene expression analysis, protein interaction network analysis, and bioinformatics, it was possible to determine which member of the III f family, LibHLH29, is important for the synthesis of anthocyanin glycosides in L. indica. Its expression was confirmed by qRT-PCR, and the results were essentially compatible with the transcriptome data. It was more prominent in the light-colored bloom stage the color-transition stage of L. indica 'Zihua Guifei'. It can be further investigated as a major candidate gene for regulating anthocyanin glycoside synthesis in L. indica, thus laying the foundation for an in-depth study of the interactions among transcription factors.

摘要

基本螺旋-环-螺旋(bHLH)家族是三大转录因子家族之一,在植物生长发育过程中发挥着重要的转录调控作用。决定紫薇观赏品质的最重要因素之一是花色。然而,bHLH 转录因子家族在紫薇花色苷合成中的功能尚未阐明。利用花色转录组数据,本研究在紫薇中发现了 79 个 LibHLH 基因。系统发育分析表明,LibHLH 基因可分为 16 个亚家族,同一亚家族的大多数基因具有相似的保守基序。在紫薇‘紫华贵妃’花瓣生长的三个发育阶段测定了花瓣总花色苷糖苷含量。结果表明,总花色苷糖苷含量随着生长发育逐渐增加,在盛开期积累最多。通过基因表达分析、蛋白互作网络分析和生物信息学,确定 III f 家族的成员 LibHLH29 对紫薇花色苷合成很重要。通过 qRT-PCR 进行了验证,结果与转录组数据基本一致。在紫薇‘紫华贵妃’的浅色开花期(花色转变期)表现更为明显。可以进一步作为调控紫薇花色苷合成的主要候选基因进行研究,从而为深入研究转录因子之间的相互作用奠定基础。

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