Goel Kapil Kumar, Chahal Sandhya, Kumar Devendra, Jaiswal Shivani, Nainwal Nidhi, Singh Rahul, Mahajan Shriya, Rawat Pramod, Yadav Savita, Fartyal Prachi, Ahmad Gazanfar, Jha Vibhu, Dwivedi Ashish Ranjan
Department of Pharmaceutical Sciences, Gurukul Kangri (Deemed to Be University) Haridwar 249404 Uttarakhand India.
Department of Chemistry, Chaudhary Ranbir Singh University Jind India-126102.
RSC Med Chem. 2024 Sep 16;15(12):4138-52. doi: 10.1039/d4md00461b.
In the quest to identify new anti-Alzheimer agents, we employed drug repositioning or drug repositioning techniques on approved USFDA small molecules. Herein, we report the structure-based virtual screening (SBVS) of 1880 USFDA-approved drugs. The -based identification was followed by calculating Prime MMGB-SA binding energy and molecular dynamics simulation studies. The cumulative analysis led to identifying domperidone as an identified hit. Domperidone was further corroborated using anticholinesterase-based assessment, keeping donepezil as a positive control. The analysis revealed that the identified lead (domperidone) could induce an inhibitory effect on AChE in a dose-dependent manner with an IC of 3.67 μM as compared to donepezil, which exhibited an IC of 1.37 μM. However, as domperidone is known to have poor BBB permeability, we rationally proposed new analogues utilizing the principles of bioisosterism. The bioisostere-clubbed analogues were found to have better BBB permeability, affinity, and stability within the catalytic domain of AChE molecular docking and dynamics studies. The proposed bioisosteres may be synthesized in the future. They may plausibly be explored for their implication in the developmental progress of new anti-Alzheimer agent achieved repurposing techniques in future.
在寻找新型抗阿尔茨海默病药物的过程中,我们对美国食品药品监督管理局(USFDA)批准的小分子药物采用了药物重新定位或药物重新定位技术。在此,我们报告了对1880种USFDA批准药物的基于结构的虚拟筛选(SBVS)。基于结构的鉴定之后是计算Prime MMGB-SA结合能和分子动力学模拟研究。累积分析导致确定多潘立酮为一个命中靶点。使用基于抗胆碱酯酶的评估进一步证实了多潘立酮,将多奈哌齐作为阳性对照。分析表明,与多奈哌齐(IC为1.37μM)相比,确定的先导物(多潘立酮)可以剂量依赖性方式诱导对乙酰胆碱酯酶(AChE)的抑制作用,IC为3.67μM。然而,由于已知多潘立酮的血脑屏障(BBB)通透性较差,我们合理地利用生物电子等排原理提出了新的类似物。通过分子对接和动力学研究发现,生物电子等排体组合的类似物在AChE催化结构域内具有更好的BBB通透性、亲和力和稳定性。所提出的生物电子等排体可能在未来合成。它们可能在未来通过重新定位技术实现的新型抗阿尔茨海默病药物的开发进程中得到合理探索。