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基于表面增强拉曼光谱的微滴平台用于高效生物合成D-苯乳酸菌株的高通量筛选。

SERS-based microdroplet platform for high-throughput screening of strains for the efficient biosynthesis of D-phenyllactic acid.

作者信息

Hu Lin, Luo Ruoshi, Wang Dan, Lin Fanzhen, Xiao Kaixing, Kang Yaqi

机构信息

Department of Chemical Engineering, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing, China.

出版信息

Front Bioeng Biotechnol. 2024 Sep 20;12:1470830. doi: 10.3389/fbioe.2024.1470830. eCollection 2024.

DOI:10.3389/fbioe.2024.1470830
PMID:39372433
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11449890/
Abstract

D-Phenyllactic acid (D-PLA) is a potent antimicrobial typically synthesized through chemical methods. However, due to the complexity and large pollution of these reactions, a simpler and more eco-friendly approach was needed. In this study, a strain for D-PLA biosynthesis was constructed, but the efficiency was restricted by the activity of D-lactate dehydrogenase (DLDH). To address this issue, a DLDH mutant library was constructed and the Surface-Enhanced Raman Spectroscopy (SERS) was employed for the precise quantification of D-PLA at the single-cell level. The TB24 mutant exhibited a significant improvement in D-PLA productivity and a 23.03-fold increase in enzymatic activity, which was attributed to the enhanced hydrogen bonding and increased hydrophobicity within the substrate-binding pocket. By implementing multi-level optimization strategies, including the co-expression of glycerol dehydrogenase (GlyDH) with DLDH, chassis cell replacement, and RBS engineering, a significant increase in D-PLA yields was achieved, reaching 128.4 g/L. This study underscores the effectiveness of SERS-based microdroplet high-throughput screening (HTS) in identifying superior mutant enzymes and offers a strategy for large-scale D-PLA biotransformation.

摘要

D-苯乳酸(D-PLA)是一种通常通过化学方法合成的强效抗菌剂。然而,由于这些反应的复杂性和大量污染,需要一种更简单、更环保的方法。在本研究中,构建了一种用于D-PLA生物合成的菌株,但效率受到D-乳酸脱氢酶(DLDH)活性的限制。为了解决这个问题,构建了一个DLDH突变体文库,并采用表面增强拉曼光谱(SERS)在单细胞水平上对D-PLA进行精确量化。TB24突变体在D-PLA生产力方面有显著提高,酶活性提高了23.03倍,这归因于底物结合口袋内氢键增强和疏水性增加。通过实施多级优化策略,包括甘油脱氢酶(GlyDH)与DLDH共表达、底盘细胞替换和核糖体结合位点(RBS)工程,D-PLA产量显著提高,达到128.4 g/L。本研究强调了基于SERS的微滴高通量筛选(HTS)在鉴定优良突变酶方面的有效性,并为大规模D-PLA生物转化提供了一种策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/661758351bc2/fbioe-12-1470830-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/38cd8f3fe72d/fbioe-12-1470830-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/8936a927f4fd/fbioe-12-1470830-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/a09203f71868/fbioe-12-1470830-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/d2bd7fd4a294/fbioe-12-1470830-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/30dbf83472f6/fbioe-12-1470830-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/a592cfa77f5f/fbioe-12-1470830-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/661758351bc2/fbioe-12-1470830-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/38cd8f3fe72d/fbioe-12-1470830-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/8936a927f4fd/fbioe-12-1470830-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/a09203f71868/fbioe-12-1470830-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/d2bd7fd4a294/fbioe-12-1470830-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/30dbf83472f6/fbioe-12-1470830-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/a592cfa77f5f/fbioe-12-1470830-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1519/11449890/661758351bc2/fbioe-12-1470830-g007.jpg

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