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工程菌几丁质酶在工业中的应用:从蛋白质工程到菌株突变!物理、分子和计算方法的综合评述。

Engineering Bacterial Chitinases for Industrial Application: From Protein Engineering to Bacterial Strains Mutation! A Comprehensive Review of Physical, Molecular, and Computational Approaches.

机构信息

School of Life Sciences, Jiangsu University, Zhenjiang, Jiangsu 212000, P. R. China.

Department of Cell Biology and Genetics, Shantou University Medical College, Shantou 515041, P. R. China.

出版信息

J Agric Food Chem. 2024 Oct 23;72(42):23082-23096. doi: 10.1021/acs.jafc.4c06856. Epub 2024 Oct 10.

Abstract

Bacterial chitinases are integral in breaking down chitin, the natural polymer in crustacean and insect exoskeletons. Their increasing utilization across various sectors such as agriculture, waste management, biotechnology, food processing, and pharmaceutical industries highlights their significance as biocatalysts. The current review investigates various scientific strategies to maximize the efficiency and production of bacterial chitinases for industrial use. Our goal is to optimize the heterologous production process using physical, molecular, and computational tools. Physical methods focus on isolating, purifying, and characterizing chitinases from various sources to ensure optimal conditions for maximum enzyme activity. Molecular techniques involve gene cloning, site-directed mutation, and CRISPR-Cas9 gene editing as an approach for creating chitinases with improved catalytic activity, substrate specificity, and stability. Computational approaches use molecular modeling, docking, and simulation techniques to accurately predict enzyme-substrate interactions and enhance chitinase variants' design. Integrating multidisciplinary strategies enables the development of highly efficient chitinases tailored for specific industrial applications. This review summarizes current knowledge and advances in chitinase engineering to serve as an indispensable guideline for researchers and industrialists seeking to optimize chitinase production for various uses.

摘要

细菌几丁质酶在分解几丁质(甲壳类动物和昆虫外骨骼中的天然聚合物)方面起着重要作用。它们在农业、废物管理、生物技术、食品加工和制药等各个领域的应用日益广泛,凸显了它们作为生物催化剂的重要性。本综述研究了各种科学策略,以最大限度地提高细菌几丁质酶的效率和产量,用于工业用途。我们的目标是使用物理、分子和计算工具优化异源生产过程。物理方法侧重于从各种来源中分离、纯化和表征几丁质酶,以确保在最大酶活性的最佳条件下进行。分子技术涉及基因克隆、定点突变和 CRISPR-Cas9 基因编辑,作为一种方法来创建具有改进的催化活性、底物特异性和稳定性的几丁质酶。计算方法使用分子建模、对接和模拟技术来准确预测酶-底物相互作用,并增强几丁质酶变体的设计。整合多学科策略可以开发出针对特定工业应用的高效几丁质酶。本综述总结了几丁质酶工程的最新知识和进展,为寻求优化几丁质酶生产以满足各种用途的研究人员和工业家提供了不可或缺的指导。

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