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利用启发式算法优化绵羊生长曲线。

Optimizing sheep growth curves using a meta-heuristic algorithm.

机构信息

Graduate Program in Production Engineering, Universidade Paulista, R. Dr. Bacelar 1212, São Paulo, 04026-002, Brazil.

Animal Science, Universidade Federal de Roraima, BR 174, km 12, Monte Cristo, Boa Vista, 69300-000, Brazil.

出版信息

Trop Anim Health Prod. 2024 Oct 14;56(8):343. doi: 10.1007/s11250-024-04188-4.

DOI:10.1007/s11250-024-04188-4
PMID:39400727
Abstract

Sheep were among the first animals domesticated by humans, and to this day, small ruminants are primarily raised for their meat, milk, and wool. This study evaluated the goodness of fit for growth curve models using observed age and weight data from crossbred lambs of various breeds based on the mean values between paired breeds. We employed a hybrid metaheuristic algorithm, combining a simulated annealing (SA) algorithm and a genetic algorithm (GA) called SAGAC, to determine the optimal parameter values for growth models, ensuring the best alignment between simulated and observed curves. The goodness of fit and model accuracy was assessed using the coefficient of determination (R), Mean Absolute Error (MAE), Root Mean Square Error (RMSE), and Mean Absolute Percentage Error (MAPE). Errors were measured by comparing the criteria differences between simulated and observed data. Thirty crossbreed combinations were simulated, considering the average weight. Analysis of the observed and simulated growth curves indicated that specific crossbreeding scenarios produced promising results. This simulation approach is believed to assist geneticists in predicting potential crossbreeding outcomes, thereby saving time and financial resources in field research.

摘要

绵羊是人类最早驯化的动物之一,时至今日,小反刍动物主要还是以其肉、奶和羊毛为主要养殖目的。本研究通过基于配对品种均值的杂种羔羊各品种间的观察到的年龄和体重数据,评价了生长曲线模型的拟合优度。我们采用了一种混合元启发式算法,将模拟退火(SA)算法和遗传算法(GA)相结合,称为 SAGAC,用于确定生长模型的最优参数值,确保模拟曲线与观测曲线之间的最佳拟合。通过决定系数(R)、平均绝对误差(MAE)、均方根误差(RMSE)和平均绝对百分比误差(MAPE)来评估拟合优度和模型准确性。通过比较模拟数据和观察数据之间的标准差异来衡量误差。我们模拟了 30 个杂交组合,考虑了平均体重。对观察到的和模拟的生长曲线的分析表明,特定的杂交方案产生了有希望的结果。这种模拟方法被认为可以帮助遗传学家预测潜在的杂交结果,从而节省实地研究中的时间和财务资源。

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本文引用的文献

1
Pre-weaning performance and commercial growth curve in Dorper, Katahdin, and Romanov crossed lambs in a highland zone from central Mexico.在墨西哥中部高地地区,对杂交羔羊(多赛特羊、卡提根羊和罗曼诺夫羊)进行断奶前表现和商业生长曲线的研究。
Trop Anim Health Prod. 2022 Jun 2;54(3):194. doi: 10.1007/s11250-022-03202-x.
2
Farming systems in sheep rearing: Impact on growth and reproductive performance, nutrient digestibility, disease incidence and heat stress indices.绵羊养殖中的饲养系统:对生长和繁殖性能、养分消化率、疾病发生率和热应激指标的影响。
PLoS One. 2021 Jan 13;16(1):e0244922. doi: 10.1371/journal.pone.0244922. eCollection 2021.
3
Evaluation of non-linear models for genetic parameters estimation of growth curve traits in Kermani sheep.
克尔曼尼羊生长曲线性状遗传参数估计的非线性模型评估
Trop Anim Health Prod. 2019 Nov;51(8):2203-2212. doi: 10.1007/s11250-019-01927-w. Epub 2019 May 24.
4
Appraisal of growth curve in Sirohi goat using non-linear growth curve models.使用非线性生长曲线模型评估西罗希山羊的生长曲线
Trop Anim Health Prod. 2019 Jun;51(5):1135-1140. doi: 10.1007/s11250-018-01794-x. Epub 2019 Jan 2.
5
Fattening performance of purebred and crossbred lambs from fat-tailed Kurdi ewes mated to four Iranian native ram breeds.将肥尾库尔德母羊与四个伊朗本土公羊品种交配所产纯种和杂交羔羊的育肥性能
Trop Anim Health Prod. 2012 Feb;44(2):217-23. doi: 10.1007/s11250-011-0001-4. Epub 2011 Nov 11.
6
Factors that alter the growth and development of ruminants.影响反刍动物生长发育的因素。
J Anim Sci. 1993 Nov;71(11):3138-50. doi: 10.2527/1993.71113138x.