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非共价相互作用对2,4-二氧代-4-苯基丁酸配合物稳定性和结构性质的影响:一项计算分析

Effect of non-covalent interactions on the stability and structural properties of 2,4-dioxo-4-phenylbutanoic complex: a computational analysis.

作者信息

Mohammadi Marziyeh, Sharifi Fatemeh, Khanmohammadi Azadeh

机构信息

Department of Chemistry, Faculty of Science, Vali-e-Asr University of Rafsanjan, Rafsanjan, Iran.

Department of Chemistry, Payame Noor University (PNU), P.O. Box 19395‑4697, Tehran, Iran.

出版信息

J Mol Model. 2024 Oct 15;30(11):376. doi: 10.1007/s00894-024-06176-9.

Abstract

CONTEXT

The 2,4-dioxo-4-phenylbutanoic acid (DPBA) is a subject of interest in pharmaceutical research, particularly in developing new drugs targeting viral and bacterial infections. Complexation with metal ions can improve the stability and solubility of organic compounds. The present study uses quantum chemical calculations to explore the structural and electronic results arising from the interaction between the metal cation (Fe) and the π-system of DPBA in different solvents. For this purpose, the analyses of atoms in molecules (AIM) and natural bond orbital (NBO) are employed to comprehend the interaction features and the charge delocalization during the process of complexation. The results demonstrate that the strongest/weakest interactions are evident when the complex is situated in non-polar/polar solvents, respectively. In addition, the investigated complex exhibits two intramolecular hydrogen bonds (IMHBs) characterized by the O-H···O motif. The results indicate that the HBs present in the complex fall within the category of weak to medium HBs. Moreover, the O-H···O HBs are influenced by cation-π interactions, which can increase/decrease their strength in polar/non-polar solvents. To enhance understanding of the interactions above, an examination is conducted on various physical properties including the energy gap, electronic chemical potential, chemical hardness, softness, and electrophilicity power.

METHOD

All calculations are conducted within the density functional theory (DFT) using the ωB97XD functional and 6-311 +  + G(d,p) basis set. The computations are performed using the quantum chemistry package GAMESS, and the obtained results are visualized by employing the GaussView program.

摘要

背景

2,4-二氧代-4-苯基丁酸(DPBA)是药物研究中的一个关注对象,特别是在开发针对病毒和细菌感染的新药方面。与金属离子络合可以提高有机化合物的稳定性和溶解性。本研究使用量子化学计算来探索在不同溶剂中金属阳离子(Fe)与DPBA的π-体系之间相互作用所产生的结构和电子结果。为此,采用分子中的原子(AIM)分析和自然键轨道(NBO)分析来理解络合过程中的相互作用特征和电荷离域。结果表明,当络合物分别位于非极性/极性溶剂中时,最强/最弱的相互作用是明显的。此外,所研究的络合物表现出两个以O-H···O基序为特征的分子内氢键(IMHBs)。结果表明,络合物中存在的氢键属于弱到中等强度的氢键。而且,O-H···O氢键受阳离子-π相互作用的影响,在极性/非极性溶剂中,这种相互作用可以增加/降低其强度。为了加深对上述相互作用的理解,对包括能隙、电子化学势、化学硬度、软度和亲电能力在内的各种物理性质进行了考察。

方法

所有计算均在密度泛函理论(DFT)框架内使用ωB97XD泛函和6-311++G(d,p)基组进行。计算使用量子化学软件包GAMESS进行,所得结果通过GaussView程序进行可视化。

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