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普通人群中特发性脊柱侧凸与精神分裂症之间的遗传重叠。

Genetic overlap between idiopathic scoliosis and schizophrenia in the general population.

作者信息

de Reuver Steven, Engchuan Worrawat, Safarian Nickie, Zarrei Mehdi, Vorstman Jacob A S, Castelein René M, Breetvelt Elemi J

机构信息

Department of Orthopedic Surgery, University Medical Center Utrecht, P.O. Box 85500, 3508 GA, Utrecht, The Netherlands.

The Centre for Applied Genomics, The Hospital for Sick Children, Toronto, ON, Canada.

出版信息

Spine Deform. 2025 Mar;13(2):413-422. doi: 10.1007/s43390-024-00979-9. Epub 2024 Oct 15.

Abstract

INTRODUCTION

Adolescent idiopathic scoliosis (AIS) and schizophrenia (SCZ) are two distinct conditions with poorly understood aetiologies that both emerge in otherwise healthy young adolescents. One rare genetic condition associated with both phenotypic outcomes is the 22q11.2 deletion (22q11DS). This microdeletion, encompassing 47 genes, occurs in approximately 1 in 2,148 live births and confers a 20-fold higher risk for both AIS and schizophrenia compared to the general population. In the general population (non-22q11DS carriers), AIS and SCZ have also been reported to be related and genetic studies suggest the involvement of genetic variants implicated in the central nervous functioning. In this study, our objective was to further investigate genetic overlaps between these conditions in the general population. Specifically, we aimed to explore the role of genes within the 22q11.2 region, not only in terms of common variants but also their potential impact on gene networks and biopathways.

METHODS

We used summary statistics from three genome-wide association studies (GWAS): two focused on AIS (n = 11,210), and one on schizophrenia (n = 36,989). To explore potential overlaps between the two conditions, we conducted a comparative analysis on the significance-based ranked single nucleotide polymorphisms (SNPs) that are associated with both AIS and SCZ. Next, we employed in silico analyses to assess gene-networks enrichment for the most significant SNPs and investigate the contribution of genes within the 22q11.2 region. Post-hoc analysis was conducted to explore the biological pathways correlated with SNPs significantly associated with both AIS and SCZ.

RESULTS

The in silico analyses revealed a significant (adjusted-p < 0.05) genetic overlap between SCZ and both AIS cohorts. The top 3% of the most significant SNPs associated with both conditions exhibited a distinct enrichment cluster which is unlikely to be a result of chance (p < 3e-04). The gene-networks analyses showed a significant overlap of 26-41% with the ones involving genes in the 22q11DS region. However, there was no overlap between SNPs in this region and the most significant SNPs identified in the GWAS.

CONCLUSION

This study revealed compelling evidence that beyond the shared association with 22q11DS as a rare genetic variant, AIS and SCZ exhibit common genetic risk variants and an overlap of important genes. The gene networks enriched by the most significant SNPs for both conditions also intersect with the ones involving genes in the 22q11DS region. However, SNPs within this region were not overrepresented among the most significant SNPs from GWAS for both conditions. Notably, gene networks linked to the risk for both conditions suggest an involvement of biopathways related to cellular signaling and neuronal development.

摘要

引言

青少年特发性脊柱侧凸(AIS)和精神分裂症(SCZ)是两种不同的疾病,其病因尚不清楚,均出现在其他方面健康的青少年中。与这两种表型结果相关的一种罕见遗传病是22q11.2缺失(22q11DS)。这种微缺失包含47个基因,大约每2148例活产中就有1例发生,与普通人群相比,患AIS和精神分裂症的风险高出20倍。在普通人群(非22q11DS携带者)中,也有报道称AIS和SCZ有关联,遗传研究表明与中枢神经功能有关的遗传变异参与其中。在本研究中,我们的目的是进一步调查普通人群中这些疾病之间的遗传重叠情况。具体而言,我们旨在探索22q11.2区域内基因的作用,不仅从常见变异的角度,还包括它们对基因网络和生物途径的潜在影响。

方法

我们使用了三项全基因组关联研究(GWAS)的汇总统计数据:两项聚焦于AIS(n = 11210),一项聚焦于精神分裂症(n = 36989)。为了探索这两种疾病之间的潜在重叠,我们对与AIS和SCZ均相关的基于显著性排名的单核苷酸多态性(SNP)进行了比较分析。接下来,我们采用计算机模拟分析来评估最显著SNP的基因网络富集情况,并研究22q11.2区域内基因的贡献。进行了事后分析,以探索与AIS和SCZ均显著相关的SNP相关的生物途径。

结果

计算机模拟分析显示,SCZ与两个AIS队列之间存在显著的(校正p < 0.05)遗传重叠。与这两种疾病均相关的最显著SNP的前3%表现出一个独特的富集簇,不太可能是偶然结果(p < 3e - 04)。基因网络分析显示,与涉及22q11DS区域基因的网络有26% - 41%的显著重叠。然而,该区域的SNP与GWAS中鉴定出的最显著SNP之间没有重叠。

结论

本研究揭示了令人信服的证据,即除了作为罕见遗传变异与22q11DS的共同关联外,AIS和SCZ还表现出共同的遗传风险变异和重要基因的重叠。两种疾病最显著SNP富集的基因网络也与涉及22q11DS区域基因的网络相交。然而,该区域内的SNP在两种疾病GWAS的最显著SNP中并未过度代表。值得注意的是,与两种疾病风险相关的基因网络表明,与细胞信号传导和神经元发育相关的生物途径参与其中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2355/11893639/7cdef8d28125/43390_2024_979_Fig1_HTML.jpg

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