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基于原子力显微镜数据的单分子水平定量分析揭示了蜂毒素与革兰氏阴性菌中脂多糖的相互作用。

Single-Molecule-Level Quantification Based on Atomic Force Microscopy Data Reveals the Interaction between Melittin and Lipopolysaccharide in Gram-Negative Bacteria.

机构信息

Animal Nutrition Institute, Chongqing Academy of Animal Science, Chongqing 402460, China.

Institute of Nutrition and Feed, National Center of Technology Innovation for Pigs, Chongqing 402460, China.

出版信息

Int J Mol Sci. 2024 Sep 29;25(19):10508. doi: 10.3390/ijms251910508.

DOI:10.3390/ijms251910508
PMID:39408837
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11477153/
Abstract

The interaction forces and mechanical properties of the interaction between melittin (Mel) and lipopolysaccharide (LPS) are considered to be crucial driving forces for Mel when killing Gram-negative bacteria (GNB). However, how their interaction forces perform at the single-molecule level and the dissociation kinetic characteristics of the Mel/LPS complex remain poorly understood. In this study, the single-molecule-level interaction forces between Mel and LPSs from K-12, O55:B5, O111:B4, and O128:B12 were explored using atomic force microscopy (AFM)-based single-molecule force spectroscopy (SMFS). AFM-based dynamic force spectroscopy (DFS) and an advanced analytical model were employed to investigate the kinetic characteristics of the Mel/LPS complex dissociation. The results indicated that Mel could interact with both rough (R)-form LPS ( K-12) and smooth (S)-form LPSs ( O55:B5, O111:B4, and O128:B12). The S-form LPS showed a more robust interaction with Mel than the R-form LPS, and a slight difference existed in the interaction forces between Mel and the diverse S-form LPS. Mel interactions with the S-form LPSs showed greater specific and non-specific interaction forces than the R-form LPS ( < 0.05), as determined by AFM-based SMFS. However, there was no significant difference in the specific and non-specific interaction forces among the three samples of S-form LPSs ( > 0.05), indicating that the variability in the O-antigen did not affect the interaction between Mel and LPSs. The DFS result showed that the Mel/S-form LPS complexes had a lower dissociation rate constant, a shorter energy barrier width, a longer bond lifetime, and a higher energy barrier height, demonstrating that Mel interacted with S-form LPS to form more stable complexes. This research enhances the existing knowledge of the interaction micromechanics and kinetic characteristics of Mel and LPS at the single-molecule level. Our research may help with the design and evaluation of new anti-GNB drugs.

摘要

蜂毒素(Mel)与脂多糖(LPS)相互作用的相互作用力和力学特性被认为是 Mel 杀死革兰氏阴性菌(GNB)的关键驱动力。然而,它们在单分子水平上的相互作用力以及 Mel/LPS 复合物的解离动力学特性仍知之甚少。在这项研究中,使用原子力显微镜(AFM)-基于单分子力谱(SMFS)研究了 Mel 与 K-12、O55:B5、O111:B4 和 O128:B12 的 LPS 之间的单分子级相互作用力。AFM 基于动态力谱(DFS)和先进的分析模型被用来研究 Mel/LPS 复合物解离的动力学特性。结果表明,Mel 可以与粗糙(R)形式 LPS(K-12)和光滑(S)形式 LPS(O55:B5、O111:B4 和 O128:B12)相互作用。S 形式 LPS 与 Mel 的相互作用比 R 形式 LPS 更牢固,而 Mel 与不同 S 形式 LPS 之间的相互作用力存在微小差异。通过 AFM 基于 SMFS 测定,Mel 与 S 形式 LPS 的相互作用表现出更大的特异性和非特异性相互作用力,比 R 形式 LPS 大(<0.05)。然而,三种 S 形式 LPS 的特异性和非特异性相互作用力没有显著差异(>0.05),这表明 O-抗原的变异性并不影响 Mel 与 LPS 之间的相互作用。DFS 结果表明,Mel/S 形式 LPS 复合物的解离速率常数较低,能量势垒宽度较短,键寿命较长,能量势垒高度较高,这表明 Mel 与 S 形式 LPS 相互作用形成更稳定的复合物。这项研究增强了现有关于 Mel 和 LPS 在单分子水平上的相互作用力学和动力学特性的知识。我们的研究可能有助于新的抗 GNB 药物的设计和评估。

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