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双质粒 Mini-Tn5 系统稳定整合目标基因的多拷贝。

Dual-Plasmid Mini-Tn5 System to Stably Integrate Multicopy of Target Genes in .

机构信息

State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, People's Republic of China.

Clinical Laboratory, Qingdao Fuwai Cardiovascular Hospital, Qingdao, Shandong 266024, People's Republic of China.

出版信息

ACS Synth Biol. 2024 Nov 15;13(11):3523-3538. doi: 10.1021/acssynbio.4c00140. Epub 2024 Oct 17.

DOI:10.1021/acssynbio.4c00140
PMID:39418641
Abstract

The efficiency of valuable metabolite production by engineered microorganisms underscores the importance of stable and controllable gene expression. While plasmid-based methods offer flexibility, integrating genes into host chromosomes can establish stability without selection pressure. However, achieving site-directed multicopy integration presents challenges, including site selection and stability. We introduced a stable multicopy integration method by using a novel dual-plasmid mini-Tn5 system to insert genes into 's genome. The gene of interest was combined with a removable antibiotic resistance gene. After the selection of bacteria with inserted genes, the antibiotic resistance gene was removed. Optimizations yielded an integration efficiency of approximately 5.5 × 10 per recipient cell in a single round. Six rounds of integration resulted in 19 and 5 copies of the gene in the RecA strain MG1655 and the RecA strain XL1-Blue MRF', respectively. Additionally, we integrated a polyhydroxybutyrate (PHB) synthesis gene cluster into MG1655, yielding an 8-copy integration strain producing more PHB than strains with the cluster on a high-copy plasmid. The method was efficient in generating gene insertions in various strains, and the inserted genes were stable after extended culture. This stable, high-copy integration tool offers potential for diverse applications in synthetic biology.

摘要

工程微生物对有价值代谢产物的高效生产凸显了稳定可控的基因表达的重要性。虽然基于质粒的方法具有灵活性,但将基因整合到宿主染色体中可以在没有选择压力的情况下建立稳定性。然而,实现定点多拷贝整合存在挑战,包括位点选择和稳定性。我们引入了一种稳定的多拷贝整合方法,使用新型双质粒 mini-Tn5 系统将基因插入到大肠杆菌基因组中。目的基因与可移动抗生素抗性基因结合。在选择插入基因的细菌后,去除抗生素抗性基因。经过优化,在单个循环中,每个受体细胞的整合效率约为 5.5×10。在 RecA 菌株 MG1655 和 RecA 菌株 XL1-Blue MRF'中,经过六轮整合,分别获得了 19 和 5 个 基因拷贝。此外,我们将聚羟基丁酸酯(PHB)合成基因簇整合到大肠杆菌 MG1655 中,得到的 8 个拷贝整合菌株产生的 PHB 多于带有该簇的高拷贝质粒菌株。该方法在各种大肠杆菌菌株中高效地产生基因插入,并且在延长培养后插入的基因稳定。这种稳定的、高拷贝的整合工具为合成生物学中的各种应用提供了潜力。

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