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鉴定三个 LAMM 综合征家系中的新型 FGF3 变异体和新表型。

Identification of a novel FGF3 variant and a new phenotype in three LAMM syndrome families.

机构信息

Department of the Affiliated Eye and ENT Hospital, State Key Laboratory of Medical Neurobiology, ENT Institute and Otorhinolaryngology, Fudan University, Shanghai, 200031, China.

NHC Key Laboratory of Hearing Medicine, Fudan University, Shanghai, 200031, China.

出版信息

BMC Med Genomics. 2024 Oct 18;17(1):254. doi: 10.1186/s12920-024-02023-1.

DOI:10.1186/s12920-024-02023-1
PMID:39425091
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11487696/
Abstract

Over 700 syndromes associated with hearing loss (HL) have been identified. Labyrinthine aplasia, microtia, and microdontia (LAMM syndrome, OMIM: 610706) is a rare HL syndrome characterized by congenital sensorineural HL, labyrinthine aplasia, type I microtia and microdontia, which is caused by biallelic variants in the FGF3 gene. Using Whole-exome sequencing (WES), we identified a novel missense FGF3 variant (c.137G > C, p. Arg46Pro (NM_005247.4) in three unrelated Uyghur ethnic families. This variant is classified as a variant of uncertain significance according to ACMG guidelines, with the applied criteria of PM3, PM2_Supporting, PP3 and PP4. Patients from the three families revealed variable clinical features. We found a novel phenotype, sparse hair, in one of the proband. Our findings expanded the variant and phenotype spectrum of LAMM syndrome and provided new insights to the diagnose and pathogenesis investigation of the disease.

摘要

已经发现了 700 多种与听力损失(HL)相关的综合征。内耳发育不全、小耳和小牙(LAMM 综合征,OMIM:610706)是一种罕见的 HL 综合征,其特征为先天性感觉神经性 HL、内耳发育不全、I 型小耳和小牙,由 FGF3 基因的双等位基因突变引起。使用全外显子组测序(WES),我们在三个无关联的维吾尔族家庭中发现了一种新的错义 FGF3 变体(c.137G>C,p.Arg46Pro(NM_005247.4)。根据 ACMG 指南,该变体被归类为意义不确定的变体,应用的标准为 PM3、PM2_Supporting、PP3 和 PP4。来自三个家庭的患者表现出不同的临床特征。我们在其中一个先证者中发现了一种新的表型,稀疏的毛发。我们的发现扩展了 LAMM 综合征的变体和表型谱,并为该疾病的诊断和发病机制研究提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/2c9268430c02/12920_2024_2023_Fig11_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/5f0a46c7af76/12920_2024_2023_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/397748b76c21/12920_2024_2023_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/1b65cc4771d9/12920_2024_2023_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/6449baec61fe/12920_2024_2023_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/ab1019314959/12920_2024_2023_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/d4319e22684b/12920_2024_2023_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/ec396eebcb0f/12920_2024_2023_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/6900ec9018c8/12920_2024_2023_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/1845b34f3d99/12920_2024_2023_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/406c67f12820/12920_2024_2023_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/784b/11487696/2c9268430c02/12920_2024_2023_Fig11_HTML.jpg

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本文引用的文献

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Syndromic Hearing Loss in Children.儿童综合征性听力损失。
Neuroimaging Clin N Am. 2023 Nov;33(4):563-580. doi: 10.1016/j.nic.2023.05.007. Epub 2023 Jul 4.
2
Identification of a homozygous frameshift mutation in the FGF3 gene in a consanguineous Iranian family: First report of labyrinthine aplasia, microtia, and microdontia syndrome in Iran and literature review.在一个伊朗的近亲家庭中鉴定出 FGF3 基因的纯合移码突变:伊朗首例迷路发育不全、小耳畸形和小牙畸形综合征的报告和文献复习。
Mol Genet Genomic Med. 2023 May;11(5):e2168. doi: 10.1002/mgg3.2168. Epub 2023 Mar 19.
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Clinical evaluation and etiologic diagnosis of hearing loss: A clinical practice resource of the American College of Medical Genetics and Genomics (ACMG).
临床听力损失评估和病因诊断:美国医学遗传学与基因组学学院(ACMG)临床实践资源
Genet Med. 2022 Jul;24(7):1392-1406. doi: 10.1016/j.gim.2022.03.018. Epub 2022 May 10.
4
Novel homozygous variant in the PDZD7 gene in a family with nonsyndromic sensorineural hearing loss.一个家族性非综合征型感觉神经性聋患者中 PDZD7 基因的新型纯合变异。
BMC Med Genomics. 2022 Jun 17;15(1):135. doi: 10.1186/s12920-022-01289-7.
5
Complete Labyrinthine Aplasia: A Unique Sign for Targeted Genetic Testing in Hearing Loss.完全性迷路发育不全:听力损失中靶向基因检测的独特指征
J Pediatr Genet. 2021 Mar;10(1):70-73. doi: 10.1055/s-0040-1708052. Epub 2020 Mar 9.
6
Genetic Spectrum of Syndromic and Non-Syndromic Hearing Loss in Pakistani Families.巴基斯坦家族性综合征型和非综合征型听力损失的遗传谱。
Genes (Basel). 2020 Nov 11;11(11):1329. doi: 10.3390/genes11111329.
7
Three New Mutations and Mild, Asymmetrical Phenotype in the Highly Distinctive LAMM Syndrome: A Report of Eight Further Cases.三种新突变与 LAMM 综合征的轻度、非对称表型:八例进一步报告。
Genes (Basel). 2019 Jul 12;10(7):529. doi: 10.3390/genes10070529.
8
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9
The Epidemiology of Deafness.耳聋的流行病学。
Cold Spring Harb Perspect Med. 2019 Sep 3;9(9):a033258. doi: 10.1101/cshperspect.a033258.
10
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Indian Pediatr. 2014 Nov;51(11):919-20. doi: 10.1007/s13312-014-0529-2.