The Calcium Signalling Group, Department of Biochemistry and Molecular Cell Biology, University Medical Centre Hamburg-Eppendorf.
The Calcium Signalling Group, Department of Biochemistry and Molecular Cell Biology, University Medical Centre Hamburg-Eppendorf; Department of Applied Medical Informatics, University Medical Centre Hamburg-Eppendorf; Department of Computational Neuroscience, University Medical Centre Hamburg-Eppendorf.
J Vis Exp. 2024 Oct 4(212). doi: 10.3791/67075.
Local, sub-second Ca signals, termed Ca microdomains, are highly dynamic and short-lived Ca signals, which result in a global [Ca]i elevation and might already determine the fate of a T cell. Upon T cell receptor activation, NAADP is formed rapidly, binding to NAADP binding proteins (HN1L/JPT2, LSM12) and their respective receptors (RyR1, TPC2) sitting on intracellular Ca stores, like the ER and lysosomes, and leading to subsequent release and elevation of [Ca]i. To capture these fast and dynamically occurring Ca signals, we developed a high-resolution imaging technique using a combination of two Ca indicators, Fluo-4 AM and FuraRed AM. For postprocessing, an open-source, semi-automated Ca microdomain detection approach was developed based on the programming language Python. Using this workflow, we are able to reliably detect Ca microdomains on a subcellular level in primary murine and human T cells in high temporal and spatial resolution fluorescence videos. This method can also be applied to other cell types, like NK cells and murine neuronal cell lines.
局部亚秒级钙离子信号,称为钙离子微区,是一种高度动态和短暂的钙离子信号,导致全局钙离子浓度升高,并可能已经决定了 T 细胞的命运。在 T 细胞受体激活后,NAADP 迅速形成,与 NAADP 结合蛋白(HN1L/JPT2、LSM12)及其各自的受体(RyR1、TPC2)结合,这些受体位于细胞内钙离子储存器上,如内质网和溶酶体,导致随后钙离子的释放和浓度升高。为了捕捉这些快速和动态发生的钙离子信号,我们开发了一种使用两种钙离子指示剂 Fluo-4 AM 和 FuraRed AM 的高分辨率成像技术。对于后期处理,我们基于 Python 编程语言开发了一种开源的、半自动的钙离子微区检测方法。使用这种工作流程,我们能够在高时空分辨率荧光视频中可靠地检测原代小鼠和人类 T 细胞中的亚细胞水平的钙离子微区。这种方法也可以应用于其他细胞类型,如 NK 细胞和小鼠神经元细胞系。