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回归本源:环状RNA在人类疾病中对宿主基因的调控机制

Back to the Origin: Mechanisms of circRNA-Directed Regulation of Host Genes in Human Disease.

作者信息

Yuan Haomiao, Liao Xizhou, Hu Ding, Guan Dawei, Tian Meihui

机构信息

Center of Forensic Investigation, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang 110122, China.

Liaoning Province Key Laboratory of Forensic Bio-Evidence Science, No. 77 Puhe Road, Shenyang North New Area, Shenyang 110122, China.

出版信息

Noncoding RNA. 2024 Sep 24;10(5):49. doi: 10.3390/ncrna10050049.

DOI:10.3390/ncrna10050049
PMID:39452835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11510700/
Abstract

Circular RNAs (circRNAs) have been shown to be pivotal regulators in various human diseases by participating in gene splicing, acting as microRNA (miRNA) sponges, interacting with RNA-binding proteins (RBPs), and translating into short peptides. As the back-splicing products of pre-mRNAs, many circRNAs can modulate the expression of their host genes through transcriptional, post-transcriptional, translational, and post-translational control via interaction with other molecules. This review provides a detailed summary of these regulatory mechanisms based on the class of molecules that they interact with, which encompass DNA, mRNA, miRNA, and RBPs. The co-expression of circRNAs with their parental gene productions (including linear counterparts and proteins) provides potential diagnostic biomarkers for multiple diseases. Meanwhile, the different regulatory mechanisms by which circRNAs act on their host genes via interaction with other molecules constitute complex regulatory networks, which also provide noticeable clues for therapeutic strategies against diseases. Future research should explore whether these proven mechanisms can play a similar role in other types of disease and clarify further details about the cross-talk between circRNAs and host genes. In addition, the regulatory relationship between circRNAs and their host genes in circRNA circularization, degradation, and cellular localization should receive further attention.

摘要

环状RNA(circRNAs)已被证明是多种人类疾病中的关键调节因子,它们通过参与基因剪接、充当微小RNA(miRNA)海绵、与RNA结合蛋白(RBPs)相互作用以及翻译成短肽来发挥作用。作为前体mRNA的反向剪接产物,许多circRNAs可通过与其他分子相互作用,在转录、转录后、翻译和翻译后水平调控其宿主基因的表达。本综述基于circRNAs与DNA、mRNA、miRNA和RBPs等分子的相互作用类别,对这些调控机制进行了详细总结。circRNAs与其亲本基因产物(包括线性对应物和蛋白质)的共表达为多种疾病提供了潜在的诊断生物标志物。同时,circRNAs通过与其他分子相互作用作用于其宿主基因的不同调控机制构成了复杂的调控网络,这也为疾病治疗策略提供了显著线索。未来的研究应探索这些已证实的机制是否能在其他类型疾病中发挥类似作用,并进一步阐明circRNAs与宿主基因之间相互作用的更多细节。此外,circRNAs与其宿主基因在circRNA环化、降解和细胞定位中的调控关系应受到进一步关注。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/479aa9e5b97b/ncrna-10-00049-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/cf1e09628732/ncrna-10-00049-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/25c57d7664a3/ncrna-10-00049-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/479aa9e5b97b/ncrna-10-00049-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/cf1e09628732/ncrna-10-00049-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/25c57d7664a3/ncrna-10-00049-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03f2/11510700/479aa9e5b97b/ncrna-10-00049-g003.jpg

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本文引用的文献

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Circular RNA in cancer.环状 RNA 与癌症。
Nat Rev Cancer. 2024 Sep;24(9):597-613. doi: 10.1038/s41568-024-00721-7. Epub 2024 Jul 29.
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Genome Res. 2024 Apr 25;34(3):376-393. doi: 10.1101/gr.278590.123.
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Super enhancer-associated circRNA-circLrch3 regulates hypoxia-induced pulmonary arterial smooth muscle cells pyroptosis by formation of R-loop with host gene.超级增强子相关的 circRNA-circLrch3 通过与宿主基因形成 R 环来调节低氧诱导的肺动脉平滑肌细胞细胞焦亡。
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Functional role of circular RNA XYLT1 in vascular remodeling and oxidative stress in aging.环状RNA XYLT1在衰老过程中血管重塑和氧化应激中的功能作用
Exp Gerontol. 2025 May;203:112728. doi: 10.1016/j.exger.2025.112728. Epub 2025 Mar 6.
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Exploratory Review and In Silico Insights into circRNA and RNA-Binding Protein Roles in γ-Globin to β-Globin Switching.环状RNA和RNA结合蛋白在γ-珠蛋白向β-珠蛋白转换中作用的探索性综述及计算机模拟分析
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