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多指标联合检测 K 抗原和荚膜多糖变异体 。

Multiplex Determination of K-Antigen and Colanic Acid Capsule Variants of .

机构信息

Microbiology Department, Libyan Biotechnology Research Center, Tripoli P.O. Box 30313, Libya.

Microbiology Department, Faculty of Medicine, Sebah University, Sebha P.O. Box 1000, Libya.

出版信息

Genes (Basel). 2024 Sep 29;15(10):1282. doi: 10.3390/genes15101282.

Abstract

is associated with the ingestion of contaminated reconstituted powdered infant formula (PIF), resulting in necrotizing enterocolitis, sepsis and meningitis in neonatal infants. Potential virulence determinants include the variable capsular polysaccharides; K-antigen and colanic acid (CA). Strains encoding for the capsule variant K2:CA2 have been strongly associated with neonatal meningitis cases. This study aimed to develop and apply a multiplex PCR assay to determine K-antigen and colanic acid types. Twenty-six strains of which had previously been isolated from food and environmental sources were used. These cover 18 multilocus sequence types and four serotypes. Based on our research findings, we have identified two K-antigen types present. Specifically, the K1-antigen was observed in sequence types ST1, ST8, ST20, ST23, ST64, ST198, ST263, ST264 and ST406, while the K2-antigen was present in ST4, ST9, ST12, ST13, ST136, ST233, ST245 and ST405. Additionally, we detected colanic acid (CA) type 1 in sequence types ST1, ST8, ST9, ST20, ST245 and ST405, and colanic acid (CA) type 2 in ST4, ST12, ST13, ST23, and ST64. We compared the predicted K-antigen and colanic acid types with the entire genome sequences of the strains. The comparison showed complete agreement between the PCR amplification results and the genomic analysis of the K-antigen and colanic acid-encoding regions. This assay is a useful tool for rapid identification of , K-antigen and colanic acid types, in routine diagnoses and foodborne investigations. In addition, it will contribute to our knowledge of virulence factors associated with life-threatening neonatal meningitis.

摘要

与摄入受污染的重组粉状婴儿配方奶粉(PIF)有关,导致新生儿坏死性小肠结肠炎、败血症和脑膜炎。潜在的毒力决定因素包括可变荚膜多糖;K 抗原和柯林斯酸(CA)。编码荚膜变体 K2:CA2 的菌株与新生儿脑膜炎病例密切相关。本研究旨在开发和应用多重 PCR 检测方法来确定 K 抗原和柯林斯酸类型。26 株先前从食品和环境来源分离的菌株用于本研究。这些菌株涵盖 18 个多位点序列型和 4 个血清型。根据我们的研究结果,我们确定了存在两种 K 抗原类型。具体来说,K1 抗原存在于 ST1、ST8、ST20、ST23、ST64、ST198、ST263、ST264 和 ST406 序列型中,而 K2 抗原存在于 ST4、ST9、ST12、ST13、ST136、ST233、ST245 和 ST405 序列型中。此外,我们在 ST1、ST8、ST9、ST20、ST245 和 ST405 序列型中检测到柯林斯酸(CA)1 型,在 ST4、ST12、ST13、ST23 和 ST64 序列型中检测到柯林斯酸(CA)2 型。我们将预测的 K 抗原和柯林斯酸类型与菌株的全基因组序列进行了比较。比较结果表明,PCR 扩增结果与 K 抗原和柯林斯酸编码区的基因组分析完全一致。该检测方法是一种快速鉴定的有用工具,可用于常规诊断和食源性调查中的 K 抗原和柯林斯酸类型。此外,它将有助于我们了解与危及生命的新生儿脑膜炎相关的毒力因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d67/11507822/e630217a97f8/genes-15-01282-g001.jpg

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