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生物正交海藻糖单酯揭示了. 中的酰化转移酶和其他细胞包膜蛋白的 - 酰化作用

Bioorthogonal Monomycolate of Trehalose Disclosed the -Mycoloylation of Mycoloyltransferases and Other Cell Envelope Proteins in .

机构信息

Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.

Université Paris-Saclay, CNRS, Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182, F-91405 Orsay, France.

出版信息

ACS Chem Biol. 2024 Nov 15;19(11):2359-2371. doi: 10.1021/acschembio.4c00502. Epub 2024 Oct 31.

Abstract

Protein mycoloylation is a recently identified unusual post-translational modification (PTM) exclusively observed in Mycobacteriales, an order of bacteria that includes several human pathogens. These bacteria possess a distinctive outer membrane, known as the mycomembrane, composed of very long-chain fatty acids called mycolic acids. It has been demonstrated that a few mycomembrane proteins undergo covalent modification with mycolic acids in the model organism through the action of mycoloyltransferase MytC. This PTM represents the first example of protein -acylation in prokaryotes and also the first example of protein modification by mycolic acid. Many questions about the specificity of protein -mycoloylation remain crucial for understanding its evolutionary significance in Mycobacteriales and its role in cell physiology. We have developed the first bioorthogonal mycolate donor featuring the natural mycolic acid pattern, enabling direct, unambiguous transfer of the lipid moiety to its acceptors and efficient metabolic labeling and enrichment of MytC protein substrates. Mass spectrometry analysis of the labeled proteins and comparative proteomic analysis of the cell envelope proteome between wild-type and Δ strains identified an unbiased list of 21 proteins likely mycoloylated in the cell. The robustness of our approach is demonstrated by the successful biological validation of mycoloylation in 6 candidate proteins within wild-type cells, revealing the characteristic profile of proteins modified with natural mycolates. These findings provide interesting insights into the significance of this new lipidation pathway and pave the way for understanding their function, especially concerning the mycoloyltransferase family that includes the essential Antigen85 enzymes in Mycobacteria.

摘要

蛋白(mycoloylation)是最近发现的一种独特的翻译后修饰(PTM),仅在分枝杆菌中观察到,分枝杆菌是一个包括几种人类病原体的细菌目。这些细菌具有独特的外膜,称为菌膜,由称为分枝菌酸的长链脂肪酸组成。已经证明,在模型生物中,一些菌膜蛋白通过 mycoloyltransferase MytC 的作用与分枝菌酸发生共价修饰。这种 PTM 代表了原核生物中蛋白质酰化的第一个例子,也是蛋白质被分枝菌酸修饰的第一个例子。关于蛋白质-mycoloylation 的特异性的许多问题对于理解其在分枝杆菌中的进化意义及其在细胞生理学中的作用仍然至关重要。我们开发了第一个具有天然分枝菌酸模式的生物正交 mycolate 供体,能够直接、明确地将脂质部分转移到其受体上,并有效地对 MytC 蛋白底物进行代谢标记和富集。对标记蛋白的质谱分析和野生型和Δ菌株之间的细胞包膜蛋白质组的比较蛋白质组学分析确定了 21 种可能在细胞中被 mycoloylated 的蛋白质的无偏列表。我们的方法的稳健性通过在野生型细胞中对 6 种候选蛋白的 mycoloylation 的成功生物学验证得到证明,揭示了用天然分枝菌酸修饰的蛋白质的特征谱。这些发现为了解这个新的脂质化途径的意义提供了有趣的见解,并为理解其功能铺平了道路,特别是对于包括分枝杆菌中必需的 Antigen85 酶在内的 mycoloyltransferase 家族。

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