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宿主因子VCPIP1作为乙型肝炎病毒多功能正向调节因子的鉴定与表征

Identification and characterization of host factor VCPIP1 as a multi-functional positive regulator of hepatitis B virus.

作者信息

Kang Ning, Liu Nannan, Liu Mu, Zhang Shimei, Yang Yang, Hou Jia, Tan Dan, Gao Zixiang, Xie Youhua, Shen Zhongliang, Liu Jing

机构信息

Key Laboratory of Medical Molecular Virology (NHC and MOE and CAMS), Department of Medical Microbiology and Parasitology, Shanghai Institute of Infectious Diseases and Biosecurity, School of Basic Medical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.

Department of Clinical Laboratory, Children's Hospital, Fudan University, Shanghai, China.

出版信息

J Virol. 2024 Dec 17;98(12):e0158124. doi: 10.1128/jvi.01581-24. Epub 2024 Nov 4.

Abstract

UNLABELLED

Chronic infection with hepatitis B virus (HBV) remains an important public health challenge. Viral covalently closed circular DNA (cccDNA) persists in infected hepatocytes and serves as the template for transcribing all viral RNA species. HBV regulatory protein X (HBx) interacts with other viral and cellular proteins to play diverse functions in viral life cycle, including modulation of cccDNA transcription activity. Here, we used proximity labeling coupled with proteomic analysis to screen for HBx-interacting host proteins. One of the identified candidates, deubiquitinating enzyme valosin-containing protein-interacting protein 1 (VCPIP1), directly binds HBx and stabilizes HBx by reducing its proteasomal degradation, which corroborated a recent report. VCPIP1-mediated upregulation of HBV transcription, antigen expression, and genome replication was demonstrated using a series of HBV replication and infection models. More importantly, VCPIP1 was found to upregulate HBV in the absence of HBx. Mechanistic studies revealed that VCPIP1 HBx-independently associates with HBV enhancer I/X promoter (EnI/Xp) and positively modulates both its promoter and enhancer activities, partially through promoting the binding of YY1 transcription factor to EnI/Xp. Results presented here expand the recently described role of VCPIP1 in HBV life cycle and establish it as a multi-functional positive regulator of this virus.

IMPORTANCE

Hepatitis B virus (HBV) encodes the regulatory protein HBx that plays crucial roles in viral life cycle and cellular processes through interacting with viral and cellular proteins. Identifying HBx-interacting proteins may reveal novel aspects of host-virus interactions. In this work, proximity labeling coupled with proteomic analysis identified multiple HBx-interacting host factors, and among these, valosin-containing protein-interacting protein 1 (VCPIP1) was confirmed to directly bind HBx and reduce its proteasomal degradation, corroborating a recent report. In addition to upregulating HBx-expressing HBV, we showed that VCPIP1 also positively regulates mutant HBV lacking HBx expression. This novel HBx-independent function of VCPIP1 was shown to involve its association with one viral promoter/enhancer element, which upregulated the latter's promoter and enhancer activities. These results establish VCPIP1 as a positive regulator of HBV that acts through multiple, diverse mechanisms and might also contribute toward revealing novel cellular functions of VCPIP1.

摘要

未标记

乙型肝炎病毒(HBV)的慢性感染仍然是一项重大的公共卫生挑战。病毒共价闭合环状DNA(cccDNA)持续存在于受感染的肝细胞中,并作为转录所有病毒RNA种类的模板。HBV调节蛋白X(HBx)与其他病毒和细胞蛋白相互作用,在病毒生命周期中发挥多种功能,包括调节cccDNA转录活性。在这里,我们使用邻近标记结合蛋白质组学分析来筛选与HBx相互作用的宿主蛋白。鉴定出的候选蛋白之一,去泛素化酶含缬酪肽蛋白相互作用蛋白1(VCPIP1),直接与HBx结合,并通过减少其蛋白酶体降解来稳定HBx,这证实了最近的一份报告。使用一系列HBV复制和感染模型证明了VCPIP1介导的HBV转录、抗原表达和基因组复制的上调。更重要的是,发现VCPIP1在没有HBx的情况下上调HBV。机制研究表明,VCPIP1不依赖于HBx与HBV增强子I/X启动子(EnI/Xp)结合,并部分通过促进YY1转录因子与EnI/Xp的结合来正向调节其启动子和增强子活性。此处呈现的结果扩展了最近描述的VCPIP1在HBV生命周期中的作用,并将其确立为该病毒的多功能正向调节因子。

重要性

乙型肝炎病毒(HBV)编码调节蛋白HBx,该蛋白通过与病毒和细胞蛋白相互作用在病毒生命周期和细胞过程中发挥关键作用。鉴定与HBx相互作用的蛋白可能揭示宿主-病毒相互作用的新方面。在这项工作中,邻近标记结合蛋白质组学分析鉴定出多个与HBx相互作用的宿主因子,其中,含缬酪肽蛋白相互作用蛋白1(VCPIP1)被证实直接与HBx结合并减少其蛋白酶体降解,这证实了最近的一份报告。除了上调表达HBx的HBV外,我们还表明VCPIP1也正向调节缺乏HBx表达的突变型HBV。VCPIP1这种新的不依赖于HBx的功能被证明涉及其与一个病毒启动子/增强子元件的结合,从而上调了后者的启动子和增强子活性。这些结果确立了VCPIP1作为HBV的正向调节因子,其通过多种不同机制发挥作用,也可能有助于揭示VCPIP1的新细胞功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5027/11650987/124c7d883cc0/jvi.01581-24.f001.jpg

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