• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

框架区和互补决定区 H1 电荷对人 VH-B1a 结构域表达、折叠、稳定性和可溶性的影响。

Effect of framework and complementarity determining region H1 charge on the human VH-B1a domain expression, folding, stability, and solubility.

机构信息

Department of Biochemistry, University of Saskatchewan, Saskatoon, SK, S7N 5E5, Canada.

Department of Pathology, University of Saskatchewan, Saskatoon, SK, S7N 5E5, Canada.

出版信息

Biochem Biophys Res Commun. 2024 Dec 20;739:150956. doi: 10.1016/j.bbrc.2024.150956. Epub 2024 Nov 9.

DOI:10.1016/j.bbrc.2024.150956
PMID:39541928
Abstract

Many difficulties related to using antibodies in diagnostic and therapeutic applications can sometimes be circumvented by using smaller, less complex single domain antibodies based on variable heavy chain (VH) domain constructs such as camelid VHH domains. However, VH domains have their own limitations, including an increased tendency to aggregate. VH domains often contain hydrophobic residues within their complementarity-determining regions (CDRs) that facilitate binding to target antigens but can also mediate VH domain aggregation, which is a concern for therapeutic applications since this can trigger immune responses. In this study, we engineered the human VH-1Ba domain to improve its stability and solubility by introducing charged amino acids in the VH domain framework region and CDRH1. We followed two strategies to improve the stability and solubility of VH domains. First, we introduced positive and negatively charged amino acids in the framework region of an autonomous human VH domain (VH-B1a) and observed the effect of framework net charge on VH domain refolding, stability, and solubility. Introducing positive charge into the VH-B1a framework increased its thermostability but slightly lowered its refolding ability and solubility. We were not able to obtain correctly folded negatively charged (-VH) VH domains. Second, we introduced a series of positive and negatively charged amino acids in the CDRH1 loop of near-neutral (VH-B1a) and positively charged (+VH) VH domains, and observed their effect on expression, refolding, stability, and solubility. For both the VH-B1a and +VH domains, we observed a decrease in melting temperature (Tm) and room temperature solubility as more negative or positive charged amino acids were added to the CDRH1. The VH-B1a domain had higher room temperature solubility for negative and slightly positive CDRH1 net charges. The + VH domain had higher Tms for all CDRH1 net charges and was better able to tolerate the adverse effects of adding positive charge to CDRH1. We observed a similar response in refolding and solubility of VH-B1a and +VH in response to changes in CDRH1 net charge after temperature-induced denaturation for negative and neutral CDRH1s. We observed a positional effect with a single Lys (31K) and double Lys (31, 32 KK) substitutions in CDRH1, which promoted VH-B1a aggregation and was partially overcome by the +VH domain. In summary, this study provides information for designing VH domains with improved biophysical properties and a +VH domain that will be useful for applications where positive surface charge and CDRH1 are desirable.

摘要

许多与在诊断和治疗应用中使用抗体相关的困难有时可以通过使用基于可变重链 (VH) 结构域构建的较小、较简单的单域抗体来规避,例如骆驼 VH 域。然而,VH 结构域有其自身的局限性,包括增加的聚集倾向。VH 结构域在其互补决定区 (CDR) 内包含疏水性残基,这些残基有助于与靶抗原结合,但也可以介导 VH 结构域聚集,这对于治疗应用是一个问题,因为这可能引发免疫反应。在这项研究中,我们通过在 VH 结构域的框架区和 CDRH1 中引入带电氨基酸来工程改造人 VH-1Ba 结构域,以提高其稳定性和可溶性。我们采用了两种策略来提高 VH 结构域的稳定性和可溶性。首先,我们在自主人 VH 结构域 (VH-B1a) 的框架区中引入了正电荷和负电荷氨基酸,并观察了框架净电荷对 VH 结构域重折叠、稳定性和可溶性的影响。在 VH-B1a 框架中引入正电荷会增加其热稳定性,但会略微降低其重折叠能力和可溶性。我们无法获得正确折叠的带负电荷的 (-VH) VH 结构域。其次,我们在近中性 (VH-B1a) 和带正电荷 (+VH) VH 结构域的 CDRH1 环中引入了一系列正电荷和负电荷氨基酸,并观察了它们对表达、重折叠、稳定性和可溶性的影响。对于 VH-B1a 和 +VH 结构域,我们观察到随着 CDRH1 中添加更多的负电荷或正电荷氨基酸,其熔点 (Tm) 和室温溶解度降低。对于负和略带正电荷的 CDRH1 净电荷,VH-B1a 结构域具有更高的室温溶解度。+VH 结构域对于所有 CDRH1 净电荷的 Tm 更高,并且能够更好地耐受在 CDRH1 中添加正电荷的不利影响。对于负和中性 CDRH1s,在温度诱导变性后,我们观察到 VH-B1a 和 +VH 对 CDRH1 净电荷变化的重折叠和可溶性的相似反应。我们观察到 CDRH1 中的单个 Lys (31K) 和双 Lys (31,32KK) 取代的位置效应,这促进了 VH-B1a 聚集,而 +VH 结构域部分克服了这一效应。总之,这项研究为设计具有改进的生物物理特性的 VH 结构域提供了信息,并且为需要正表面电荷和 CDRH1 的应用提供了一个 +VH 结构域,这将是有用的。

相似文献

1
Effect of framework and complementarity determining region H1 charge on the human VH-B1a domain expression, folding, stability, and solubility.框架区和互补决定区 H1 电荷对人 VH-B1a 结构域表达、折叠、稳定性和可溶性的影响。
Biochem Biophys Res Commun. 2024 Dec 20;739:150956. doi: 10.1016/j.bbrc.2024.150956. Epub 2024 Nov 9.
2
Optimal charged mutations in the complementarity-determining regions that prevent domain antibody aggregation are dependent on the antibody scaffold.在互补决定区中进行最优的带电突变以防止结构域抗体聚集,这取决于抗体支架。
Protein Eng Des Sel. 2014 Feb;27(2):29-39. doi: 10.1093/protein/gzt058. Epub 2014 Jan 6.
3
A single-domain antibody library based on a stability-engineered human VH3 scaffold.基于稳定性工程化人VH3支架的单域抗体文库。
Sci Rep. 2024 Jul 31;14(1):17747. doi: 10.1038/s41598-024-68680-5.
4
Solubility and stability engineering of human VH domains.人源VH结构域的溶解度与稳定性工程
Methods Mol Biol. 2012;911:355-72. doi: 10.1007/978-1-61779-968-6_21.
5
Fully Human VH Single Domains That Rival the Stability and Cleft Recognition of Camelid Antibodies.与骆驼科动物抗体的稳定性和裂隙识别能力相媲美的全人源VH单域抗体。
J Biol Chem. 2015 May 8;290(19):11905-17. doi: 10.1074/jbc.M114.614842. Epub 2015 Mar 3.
6
Aggregation-resistant domain antibodies engineered with charged mutations near the edges of the complementarity-determining regions.通过在互补决定区边缘附近的带电突变工程化设计的聚集抗性结构域抗体。
Protein Eng Des Sel. 2012 Oct;25(10):591-601. doi: 10.1093/protein/gzs042. Epub 2012 Jul 27.
7
Directed evolution of human heavy chain variable domain (VH) using in vivo protein fitness filter.利用体内蛋白质适应性筛选对人重链可变区(VH)进行定向进化。
PLoS One. 2014 Jun 3;9(6):e98178. doi: 10.1371/journal.pone.0098178. eCollection 2014.
8
Physicochemical improvement of rabbit derived single-domain antibodies by substitutions with amino acids conserved in camelid antibodies.通过用骆驼科抗体中保守的氨基酸进行替换对兔源单域抗体进行物理化学性质改善。
J Biosci Bioeng. 2018 Jun;125(6):654-661. doi: 10.1016/j.jbiosc.2018.01.006. Epub 2018 Feb 15.
9
Systematic Engineering of Optimized Autonomous Heavy-Chain Variable Domains.优化自主重链可变结构域的系统工程。
J Mol Biol. 2021 Oct 15;433(21):167241. doi: 10.1016/j.jmb.2021.167241. Epub 2021 Sep 9.
10
Contributions of the complementarity determining regions to the thermal stability of a single-domain antibody.互补决定区对单域抗体热稳定性的贡献。
PLoS One. 2013 Oct 15;8(10):e77678. doi: 10.1371/journal.pone.0077678. eCollection 2013.