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利用[3+2]环加成反应的MEDT分析:与噻吩/呋喃杂环和三唑骨架相连的螺环氧化吲哚的X射线晶体学。

Utilizing MEDT analysis of [3 + 2] cycloaddition reaction: x-ray crystallography of spirooxindole linked with thiophene/furan heterocycles and triazole framework.

作者信息

Alayyaf Abdulmajeed Abdullah, Ali M, Alwehaibi Moayad Abdullah, Al-Muhanna Muhanna K, Soliman Saied M, Ríos-Gutiérrez Mar, Haukka Matti, Barakat Assem

机构信息

Department of Chemistry, College of Science, King Saud University, P. O. Box 2455, Riyadh, 11451, Saudi Arabia.

The Material Science Research Institute, King Abdulaziz City for Science and Technology (KACST), Riyadh, 11442, Saudi Arabia.

出版信息

BMC Chem. 2024 Nov 14;18(1):229. doi: 10.1186/s13065-024-01343-8.

Abstract

Hybridization of spirooxindole with different pharmacophores such as triazole and heterocycle such as thiophene and furan moiety was achieved by the [3 + 2] cycloaddition (32CA) reaction approach. Structural investigations of the compounds 4a and 4b were performed using X-ray single crystal structure determinations and Hirshfeld analysis. Both compounds crystallized in monoclinic crystal system. The space group is P2/c for 4a and P2/n for 4b. The crystal parameters are a = 10.2619(3) Å, b = 13.6776(3) Å, c = 10.9318(3), β = 116.640(4)° for the former while a = 13.0012(1) Å, b = 14.9692(1) Å, c = 14.1178(1) Å, β = 97.101(1)° for the latter. In both compounds, the aryl group and the triazole moieties are twisted from one another. The twist angle is 84.75˚for 4a while 86.64˚ for 4b. Based on Hirshfeld calculations, the Cl…H, O…H, N…H and C…H non-covalent interactions in 4a while the O…H interactions in 4b are the most important. The molecular mechanism of the key 32CA reaction between the in situ generated azomethine ylides and the corresponding chalcones has been studied within the Molecular Electron Density Theory (MEDT). The MEDT study reveals that the low activation energies and high experimental selectivity are the result of the supernucleophilic character of the ylides and the strong electrophilicity of the chalcones, which favour the process through a high polar character. This high polar character accounts for the total endo selectivity experimentally found.

摘要

通过[3 + 2]环加成(32CA)反应方法实现了螺氧化吲哚与不同药效基团(如三唑)以及杂环(如噻吩和呋喃部分)的杂化。使用X射线单晶结构测定和Hirshfeld分析对化合物4a和4b进行了结构研究。两种化合物均结晶于单斜晶系。4a的空间群为P2/c,4b的空间群为P2/n。前者的晶体参数为a = 10.2619(3) Å,b = 13.6776(3) Å,c = 10.9318(3),β = 116.640(4)°,而后者的晶体参数为a = 13.0012(1) Å,b = 14.9692(1) Å,c = 14.1178(1) Å,β = 97.101(1)°。在这两种化合物中,芳基和三唑部分相互扭曲。4a的扭曲角为84.75˚,4b的扭曲角为86.64˚。基于Hirshfeld计算,4a中的Cl…H、O…H、N…H和C…H非共价相互作用以及4b中的O…H相互作用最为重要。在分子电子密度理论(MEDT)范围内研究了原位生成的甲亚胺叶立德与相应查尔酮之间关键的32CA反应的分子机制。MEDT研究表明,低活化能和高实验选择性是叶立德的超亲核特性和查尔酮的强亲电性的结果,这有利于通过高极性特征进行该过程。这种高极性特征解释了实验中发现的总内向选择性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f58c/11566212/7a9fcee8c160/13065_2024_1343_Sch1_HTML.jpg

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