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评估85%部分肝切除术后小鼠再生肝组织的线粒体结构和基因表达谱。

Evaluating the mitochondrial structure and gene expression profile of regenerated liver tissues in mice after 85% partial hepatectomy.

作者信息

Shi Yongquan, Lei Yu, Zhao Yanping, Zhang Shuaishuai, Xu Hongxin, Huo Li, Liu Wei, Liu Qinlong

机构信息

Department of Clinical Laboratory Center, Shandong Second Provincial General Hospital, Jinan, China.

Department of Otolaryngology, First Affiliated Hospital of Dalian Medical University, Dalian, China.

出版信息

J Gastrointest Oncol. 2024 Oct 31;15(5):2252-2264. doi: 10.21037/jgo-24-243. Epub 2024 Oct 29.

Abstract

BACKGROUND

Partial hepatectomy (PH) is the primary method used for treating liver injury and transplantation. The regeneration process after hepatectomy requires an adequate energy supply, and mitochondria serve as the primary source of energy. Alterations in genes related to the respiratory chain complex may impact the liver regeneration process. The aim of this study was the changes in mitochondrial structure and mitochondrial function in 85% PH.

METHODS

A PH (up to 85%) model was developed using male C57BL/6 mice, and the regenerated liver tissue was harvested after 24 hours. Hematoxylin and eosin staining and transmission electron microscopy were used for morphological studies. In terms of proliferation, a positive proliferating cell nuclear antigen (PCNA) rate was detected via immunohistochemistry. Real-time polymerase chain reaction was performed to identify differentially expressed genes (DEGs), which were screened using a P value of <0.05 and a |fold change| of ≥1.5. The Hiplot online tool was used for generating a volcano plot and conducting correlation analyses. R software was employed for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses for the DEGs. A combined Search Tool for the Retrieval of Interacting Genes/Proteins (STRING)-Cytoscape method was used for protein-protein interaction (PPI) network analyses, whereas cytoHubba was used to the screen core DEGs.

RESULTS

After 85% PH, we observed steatosis, an increased PCNA positivity rate, mitochondrial swelling, and a reduced number of cristae due to cristae disintegration. We screened 30 DEGs that were associated with different processes, including oxidation-reduction, oxidoreductase activity, electron transfer activity, organelle envelope, inner mitochondrial membrane processes, and oxidative phosphorylation as well as those involved in nonalcoholic fatty liver disease (NAFLD). We identified a total of six hub genes: , , , , , and .

CONCLUSIONS

The 85% PH model promotes mitochondrial complex protein expression, thereby providing energy for liver regeneration. The enriched genes were associated with oxidation-reduction, electron transfer activity, and inner mitochondrial membrane processes.

摘要

背景

部分肝切除术(PH)是治疗肝损伤和肝移植的主要方法。肝切除术后的再生过程需要充足的能量供应,而线粒体是能量的主要来源。与呼吸链复合体相关的基因改变可能会影响肝脏再生过程。本研究的目的是观察85%肝切除术后线粒体结构和功能的变化。

方法

利用雄性C57BL/6小鼠建立85%肝切除模型,术后24小时收集再生肝组织。采用苏木精-伊红染色和透射电子显微镜进行形态学研究。在增殖方面,通过免疫组织化学检测增殖细胞核抗原(PCNA)阳性率。进行实时聚合酶链反应以鉴定差异表达基因(DEGs),使用P值<0.05和|倍数变化|≥1.5进行筛选。使用Hiplot在线工具生成火山图并进行相关性分析。使用R软件对DEGs进行基因本体(GO)和京都基因与基因组百科全书(KEGG)通路富集分析。使用综合检索相互作用基因/蛋白质的搜索工具(STRING)-Cytoscape方法进行蛋白质-蛋白质相互作用(PPI)网络分析,而使用cytoHubba筛选核心DEGs。

结果

85%肝切除术后,我们观察到脂肪变性、PCNA阳性率增加、线粒体肿胀以及由于嵴解体导致嵴数量减少。我们筛选出30个与不同过程相关的DEGs,包括氧化还原、氧化还原酶活性、电子传递活性、细胞器包膜、线粒体内膜过程和氧化磷酸化,以及那些参与非酒精性脂肪性肝病(NAFLD)的过程。我们总共鉴定出6个枢纽基因:[此处原文缺失枢纽基因具体名称]。

结论

85%肝切除模型促进线粒体复合体蛋白表达,从而为肝脏再生提供能量。富集的基因与氧化还原、电子传递活性和线粒体内膜过程相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cb50/11565125/42755c4a4671/jgo-15-05-2252-f1.jpg

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