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蝉最小年龄树:隐生种形成和近期地质时间内指数增长的碱基替换率。

Cicada minimum age tree: Cryptic speciation and exponentially increasing base substitution rates in recent geologic time.

机构信息

Tohoku University, Sendai, Japan.

California State University, Fresno, Fresno, USA.

出版信息

F1000Res. 2025 Feb 14;11:308. doi: 10.12688/f1000research.76068.4. eCollection 2022.

DOI:10.12688/f1000research.76068.4
PMID:39554852
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11564946/
Abstract

We developed a new time-calibrated tree incorporating primarily endemic along with some cryptic Ryukyu islands cicada data, following the recent publication of global cicada data by Marshall . (2018), Łukasik . (2018), Simon . (2019), Price . (2019), and Hill . (2021).  A total of 352 specimens were analyzed using BEAST v1. X software with a relaxed clock model. Fossil calibrations as old as Triassic were adopted largely following Johnson . (2018) and Moulds (2018), and a Quaternary geological event calibration was adopted following Osozawa . (2012, 2021b) and input into BEAST v1. X. Our timetree suggests that Tettigarctidae had a cicada basal lineage as old as 200.63 Ma, with Derotettiginae the next oldest lineage at 99.2 Ma. Tibicininae is a sister of the remaining subfamilies of Tettigomyiinae, Cicadettinae, and Cicadidae, and their species level differentiation and radiation began at 40.57 Ma. The Cicadinae clade consists of specific tribes with paraphyletic relationship, and the vicariance and adaptive radiation generated many cryptic species in each tribe. We estimated base substitution rate as a function of age, and the result strongly indicates an exponential increase of base substitution rate in recent geologic time. The consequent increase in cicada biodiversity, including generation of cryptic species in the Ryukyu Islands and surroundings, may have been driven by the generation and spreading of C4 grasses and coeval Quaternary climate change.

摘要

我们开发了一个新的时间校准树,主要纳入了琉球群岛特有的以及一些隐存的蝉类数据,这是继 Marshall (2018)、Łukasik (2018)、Simon (2019)、Price (2019)和 Hill (2021)最近发表全球蝉类数据之后的工作。使用 BEAST v1. X 软件对总共 352 个标本进行了分析,采用了松弛时钟模型。化石校准的时间可以追溯到三叠纪,主要是根据 Johnson (2018)和 Moulds (2018)的研究结果,采用了第四纪地质事件校准,这是根据 Osozawa (2012、2021b)的研究结果输入到 BEAST v1. X 中的。我们的时间树表明,Tettigarctidae 的蝉类基础谱系的历史可以追溯到 200.63 Ma,其次是 Derotettiginae,其历史可以追溯到 99.2 Ma。Tibicininae 是其余 Tettigomyiinae、Cicadettinae 和 Cicadidae 亚科的姐妹群,其物种水平的分化和辐射始于 40.57 Ma。Cicadinae 支系由具有并系关系的特定部落组成,隔离和适应性辐射在每个部落中产生了许多隐存种。我们估计了碱基替换率随年龄的函数关系,结果强烈表明最近地质时期碱基替换率呈指数增长。蝉类生物多样性的增加,包括琉球群岛及其周边地区隐存种的产生,可能是由 C4 草的产生和传播以及同期第四纪气候变化驱动的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/2a6f2af19c9a/f1000research-11-177914-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/a9093b41ccc1/f1000research-11-177914-g0000.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/265474e8ad8d/f1000research-11-177914-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/b4c481efa10f/f1000research-11-177914-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/2a6f2af19c9a/f1000research-11-177914-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/a9093b41ccc1/f1000research-11-177914-g0000.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/265474e8ad8d/f1000research-11-177914-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/b4c481efa10f/f1000research-11-177914-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec57/11829152/2a6f2af19c9a/f1000research-11-177914-g0003.jpg

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