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APOO 表达升高可作为乳腺癌的潜在预后标志物:来自生物信息学分析和实验验证的见解。

Elevated expression of APOO as a potential prognostic marker in breast cancer: insights from bioinformatic analysis and experimental validation.

机构信息

Laboratory of Department of Surgery, the First Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510080, Guangdong, China.

Department of General Surgery, Xinqiao Hospital, Army Medical University, Chongqing, 400037, China.

出版信息

BMC Med Genomics. 2024 Nov 18;17(1):271. doi: 10.1186/s12920-024-02047-7.

Abstract

OBJECTIVE

Apolipoprotein O (APOO) has been identified through bioinformatic prediction analysis as being highly expressed in various tumors, including breast cancer (BRCA). However, further investigations are required to understand and confirm APOO's biological role in BRCA.

METHODS

Bioinformatic analyses were employed to identify genes' expression statuses and their relationship with the prognoses of patients. The genes' functions were determined in cell line by gain or loss of function assays. Mechanistic studies were carried out by western blot.

RESULTS

Our study reveals a correlation between increased APOO expression and poorer clinical outcomes in BRCA patients. The diagnostic value of APOO was demonstrated by Receiver Operating Characteristic (ROC) curve analysis, showing a notable area under the curve (AUC) of 0.937. Additionally, we observed that APOO knockdown impedes cell proliferation and migration. Gene Set Enrichment Analysis (GSEA) suggests that APOO expression is associated with the regulation of apoptosis and autophagy signaling pathways. Experimentally, modifying APOO expression in vitro influenced apoptosis and autophagy in BRCA cells. In conclusion, our findings indicate a significant link between APOO expression and BRCA progression, mediated through APOO's impact on cellular apoptosis and autophagy.

CONCLUSIONS

Our data show that APOO controls BRCA process through apoptosis and autophagy signal pathway, which might provide multiple promising choices for the treatment of BRCA.

摘要

目的

通过生物信息预测分析发现载脂蛋白 O (APOO) 在多种肿瘤中高度表达,包括乳腺癌 (BRCA)。然而,需要进一步研究来了解和确认 APOO 在 BRCA 中的生物学作用。

方法

采用生物信息学分析方法确定基因的表达状态及其与患者预后的关系。通过获得或丧失功能测定在细胞系中确定基因的功能。通过 Western blot 进行机制研究。

结果

我们的研究表明 APOO 表达增加与 BRCA 患者临床结局较差相关。通过Receiver Operating Characteristic (ROC) 曲线分析显示,APOO 的诊断价值显著,曲线下面积 (AUC) 为 0.937。此外,我们观察到 APOO 敲低可抑制细胞增殖和迁移。基因集富集分析 (GSEA) 表明 APOO 表达与细胞凋亡和自噬信号通路的调控有关。实验上,体外改变 APOO 表达可影响 BRCA 细胞中的细胞凋亡和自噬。总之,我们的研究结果表明 APOO 表达与 BRCA 进展之间存在显著关联,这种关联是通过 APOO 对细胞凋亡和自噬的影响介导的。

结论

我们的数据表明,APOO 通过细胞凋亡和自噬信号通路控制 BRCA 进程,这可能为 BRCA 的治疗提供多种有前景的选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/98d5/11572147/9aa70c2ef8f0/12920_2024_2047_Fig3_HTML.jpg

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