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长读长RNA测序:一种探索人类疾病转录组复杂性的变革性技术。

Long-read RNA sequencing: A transformative technology for exploring transcriptome complexity in human diseases.

作者信息

Ament Isabelle Heifetz, DeBruyne Nicole, Wang Feng, Lin Lan

机构信息

Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.

Graduate Group in Cell and Molecular Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.

出版信息

Mol Ther. 2025 Mar 5;33(3):883-894. doi: 10.1016/j.ymthe.2024.11.025. Epub 2024 Nov 19.

Abstract

Long-read RNA sequencing (RNA-seq) is emerging as a powerful and versatile technology for studying human transcriptomes. By enabling the end-to-end sequencing of full-length transcripts, long-read RNA-seq opens up avenues for investigating various RNA species and features that cannot be reliably interrogated by standard short-read RNA-seq methods. In this review, we present an overview of long-read RNA-seq, delineating its strengths over short-read RNA-seq, as well as summarizing recent advances in experimental and computational approaches to boost the power of long-read-based transcriptomics. We describe a wide range of applications of long-read RNA-seq, and highlight its expanding role as a foundational technology for exploring transcriptome variations in human diseases.

摘要

长读长RNA测序(RNA-seq)正在成为一种用于研究人类转录组的强大且通用的技术。通过实现全长转录本的端到端测序,长读长RNA-seq为研究各种RNA种类和特征开辟了途径,而这些是标准短读长RNA-seq方法无法可靠探究的。在本综述中,我们概述了长读长RNA-seq,阐述其相对于短读长RNA-seq的优势,并总结了实验和计算方法的最新进展,以增强基于长读长的转录组学的能力。我们描述了长读长RNA-seq的广泛应用,并强调其作为探索人类疾病转录组变异的基础技术的不断扩大的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ef9/11897757/9da69c2616af/fx1.jpg

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