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降水的时空变化驱动中国大陆的基因组大小变异。

Spatial and Temporal Variation of Precipitation Drives the Genome Size Variation in in Chinese Mainland.

作者信息

Zhang Kai, Dayananda Buddhi, Liu Yifei, Hu Zhigang, Zhang Lin

机构信息

Hubei Shizhen Laboratory, College of Pharmacy Hubei University of Chinese Medicine Wuhan China.

School of Agriculture and Food Sciences The University of Queensland Brisbane Queensland Australia.

出版信息

Ecol Evol. 2024 Nov 18;14(11):e70580. doi: 10.1002/ece3.70580. eCollection 2024 Nov.

DOI:10.1002/ece3.70580
PMID:39563706
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11573723/
Abstract

Genome size is an adaptive trait, and its variations influence the organismal phenotype and fitness. In this study, we propose a hypothesis linking variations in genome size within to ecological factors. To test this hypothesis, we employed flow cytometry to estimate genome size in seven species from Chinese mainland. Subsequently, we reconstructed the phylogenetic relationship of these species using the cytochrome oxidase subunit 1 gene and conducted phylogenetic comparative analysis to assess the relationships between genome size and niche breadth or 19 bioclimatic variables. Our findings indicate the following: (1) genome size in can be categorized into three groups, similar to the phylogenetic clades; (2) there is a negative correlation between genome size in species and the precipitation niche breadth of species; (3) the estimated divergence time of dates back 153 Mya, during the Jurassic period. We assume that consistent aridity geological periods may promote the evolution of species with a large genome size, whereas rapidly fluctuating humidity geological periods may have the opposite effect.

摘要

基因组大小是一种适应性特征,其变化会影响生物体的表型和适应性。在本研究中,我们提出了一个将基因组大小的变化与生态因素联系起来的假设。为了验证这一假设,我们采用流式细胞术估计了中国大陆七种[物种名称]的基因组大小。随后,我们利用细胞色素氧化酶亚基1基因重建了这些物种的系统发育关系,并进行了系统发育比较分析,以评估基因组大小与生态位宽度或19个生物气候变量之间的关系。我们的研究结果表明:(1)[物种名称]的基因组大小可分为三组,类似于系统发育分支;(2)[物种名称]的基因组大小与物种的降水生态位宽度之间存在负相关;(3)[物种名称]的估计分歧时间可追溯到1.53亿年前的侏罗纪时期。我们假设,持续干旱的地质时期可能会促进大基因组大小的[物种名称]物种的进化,而湿度快速波动的地质时期可能会产生相反的效果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9de/11573723/62b255c83ea8/ECE3-14-e70580-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9de/11573723/614022a8d0df/ECE3-14-e70580-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9de/11573723/62b255c83ea8/ECE3-14-e70580-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9de/11573723/614022a8d0df/ECE3-14-e70580-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9de/11573723/62b255c83ea8/ECE3-14-e70580-g001.jpg

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