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利用大环骨架实现对亲环蛋白催化口袋和守门人口袋的双重靶向

Toward Dual Targeting of Catalytic and Gatekeeper Pockets in Cyclophilins Using a Macrocyclic Scaffold.

作者信息

Dreizler Johannes K, Meyners Christian, Hausch Felix

机构信息

Department of Chemistry and Biochemistry Clemens-Schöpf-Institute, Technical University Darmstadt, Peter-Grünberg Straße 4, 64287 Darmstadt, Germany.

Centre for Synthetic Biology, Technical University Darmstadt, 64287 Darmstadt, Germany.

出版信息

ACS Med Chem Lett. 2024 Oct 28;15(11):2012-2018. doi: 10.1021/acsmedchemlett.4c00427. eCollection 2024 Nov 14.

Abstract

Cyclophilins, especially cyclophilin A, are involved in a variety of diseases, including the life cycle of many viruses. An advanced macrocyclic inhibitor of cyclophilin was reported to bind the catalytic pocket but not the neighboring gatekeeper pocket. Here we describe macrocyclic cyclophilin inhibitors bearing side chains designed to reach out to the gatekeeper pocket. After establishing a suitable synthesis allowing for late-stage modification of the relevant positions, we explored this exit vector. This culminated in a rigid ornithine-resembling analogue as a versatile building block, which was also incorporated into the macrocyclic scaffold. The use of amines as the gatekeeper-engaging modality was invalidated, but the exit vector was successfully established as a promising position for future modifications. Further work is needed to identify suitable motifs to simultaneously engage the catalytic and gatekeeper pockets in this highly developed macrocyclic scaffold.

摘要

亲环蛋白,尤其是亲环蛋白A,参与多种疾病,包括许多病毒的生命周期。据报道,一种先进的亲环蛋白大环抑制剂可结合催化口袋,但不结合相邻的守门人口袋。在此,我们描述了带有旨在伸向守门人口袋的侧链的大环亲环蛋白抑制剂。在建立了允许对相关位置进行后期修饰的合适合成方法后,我们探索了这个出口载体。这最终产生了一种刚性的类似鸟氨酸的类似物作为通用构建模块,它也被并入到大环支架中。将胺用作与守门人结合的方式是无效的,但出口载体已成功确立为未来修饰的一个有前景的位置。需要进一步开展工作,以确定合适的基序,以便在这个高度发达的大环支架中同时结合催化口袋和守门人口袋。

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