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E2F1 Promotes the Occurrence of Head and Neck Squamous Cell Carcinoma and Serves as a Prognostic Biomarker.

作者信息

Wang Jinhang, Cui Zifeng, Hei Naiheng, Yang Qian, Peng Shixiong

机构信息

Department of Stomatology, The Second Hospital of Shijiazhuang, Huaxi Road 53, Shijiazhuang, 050051, Hebei, China.

Department of Stomatology, The Fourth Hospital of Hebei Medical University, Jiankang Road 12, Shijiazhuang, 050000, Hebei, China.

出版信息

Appl Biochem Biotechnol. 2025 Feb;197(2):1258-1279. doi: 10.1007/s12010-024-05097-w. Epub 2024 Nov 20.


DOI:10.1007/s12010-024-05097-w
PMID:39565537
Abstract

Head and neck squamous cell carcinoma (HNSCC) is a common malignant tumor occurring in various sites such as the oral cavity, pharynx, larynx, and nasal cavity. This study aimed to explore the biological functions and prognostic value of E2F transcription factor 1 (E2F1) in HNSCC. Transcriptome and single-cell sequencing (scRNA-seq) data of HNSCC patients were analyzed using data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). All samples were divided into high and low expression groups based on the expression levels of E2F1. A risk model was constructed based on Lasso-Cox regression, and the differences between the two groups in terms of prognosis were explored. The scRNA-seq data of HNSCC samples were analyzed using the Seurat package to identify cell types. AUCell was used to score different types of cells, and subsequently, the interaction pathways between the high-scoring cell population and other cell populations were explored using the CellChat package. The expression level of E2F1 in tumor tissues was higher than that in normal tissues, which was confirmed by in vitro experiments. Analysis of transcriptome data from TCGA revealed significant differences in overall survival (OS) between the high and low expression groups. Prognostic genes were selected based on DEGs between the two groups, and a risk model was constructed. Subsequently, a nomogram model was constructed based on clinical factors and risk scores, which exhibited good predictive performance. The expression landscape of prognostic genes in different cell types was explored using scRNA-seq data of HNSCC samples. Dendritic cell populations were identified as high-scoring cell populations, and the pathways of interaction between this cell population and other cell populations were explored. We identified E2F1 as an independent prognostic factor closely associated with the prognosis and immune response of HNSCC.

摘要

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引用本文的文献

[1]
E2F expression profiling-based subtypes in head and neck squamous cell carcinoma: clinical relevance, prognostic implications, and personalized therapy.

World J Surg Oncol. 2025-4-24

本文引用的文献

[1]
Cell cycle regulation of the psoriasis associated gene CCHCR1 by transcription factor E2F1.

PLoS One. 2023

[2]
CDK5 promotes apoptosis and attenuates chemoresistance in gastric cancer via E2F1 signaling.

Cancer Cell Int. 2023-11-21

[3]
Transcription Factor E2F1 Enhances Hepatocellular Carcinoma Cell Proliferation and Stemness by Activating GINS1.

J Environ Pathol Toxicol Oncol. 2024

[4]
Circulating low density neutrophils are associated with resistance to anti-PD1 immunotherapy in squamous head and neck cancer.

Head Neck. 2023-12

[5]
Head and neck cancer treatment in the era of molecular medicine.

Adv Cancer Res. 2023

[6]
Expression of CD44 in Head and Neck Squamous Cell Carcinoma-An Study.

Glob Med Genet. 2023-8-16

[7]
H1-antihistamine use and head and neck cancer risk in type 2 diabetes mellitus.

Oncol Res. 2023

[8]
Targeted therapy for head and neck cancer: signaling pathways and clinical studies.

Signal Transduct Target Ther. 2023-1-16

[9]
Reviewing the epidemiology of head and neck cancer: definitions, trends and risk factors.

Br Dent J. 2022-11

[10]
Head and neck cancer explained: an overview of management pathways.

Br Dent J. 2022-11

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