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邻近蛋白质组学为探索Afadin的功能以及细胞间黏附连接的复杂性提供了一种新资源。

Proximity proteomics provides a new resource for exploring the function of Afadin and the complexity of cell-cell adherens junctions.

作者信息

Choi Wangsun, Goldfarb Dennis, Yan Feng, Major M Ben, Fanning Alan S, Peifer Mark

机构信息

Department of Biology, University of North Carolina at Chapel Hill, CB#3280, Chapel Hill, NC 27599-3280, USA.

Department of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO, USA 63110.

出版信息

bioRxiv. 2024 Nov 8:2024.11.07.622507. doi: 10.1101/2024.11.07.622507.

Abstract

The network of proteins at the interface between cell-cell adherens junctions and the actomyosin cytoskeleton provides robust yet dynamic connections that facilitate cell shape change and motility. While this was initially thought to be a simple linear connection via classic cadherins and their associated catenins, we now have come to appreciate that many more proteins are involved, providing robustness and mechanosensitivity. Defining the full network of proteins in this network remains a key objective in our field. Proximity proteomics provides a means to define these networks. Mammalian Afadin and its Drosophila homolog Canoe are key parts of this protein network, facilitating diverse cell shape changes during gastrulation and other events of embryonic morphogenesis. Here we report results of several proximity proteomics screens, defining proteins in the neighborhood of both the N- and C-termini of mammalian Afadin in the premier epithelial model, MDCK cells. We compare our results with previous screens done in other cell types, and with proximity proteomics efforts with other junctional proteins. These reveal the value of multiple screens in defining the full network of neighbors and offer interesting insights into the overlap in protein composition between different epithelial cell junctions.

摘要

细胞间黏附连接与肌动球蛋白细胞骨架之间界面处的蛋白质网络提供了强大而动态的连接,促进细胞形状改变和运动。虽然最初认为这是通过经典钙黏蛋白及其相关连环蛋白形成的简单线性连接,但我们现在认识到还有更多蛋白质参与其中,赋予了其稳健性和机械敏感性。确定该网络中完整的蛋白质网络仍然是我们领域的一个关键目标。邻近蛋白质组学提供了一种定义这些网络的方法。哺乳动物的Afadin及其果蝇同源物Canoe是该蛋白质网络的关键部分,在原肠胚形成和胚胎形态发生的其他事件中促进多种细胞形状改变。在这里,我们报告了几个邻近蛋白质组学筛选的结果,确定了在主要上皮模型MDCK细胞中哺乳动物Afadin的N端和C端附近的蛋白质。我们将我们的结果与之前在其他细胞类型中进行的筛选结果以及对其他连接蛋白的邻近蛋白质组学研究结果进行了比较。这些结果揭示了多次筛选在定义完整的邻近蛋白网络中的价值,并为不同上皮细胞连接之间蛋白质组成的重叠提供了有趣的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3820/11581034/a9f635924174/nihpp-2024.11.07.622507v1-f0001.jpg

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