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通过单细胞RNA测序和批量RNA测序的综合分析揭示白细胞介素-7受体在腹主动脉瘤中的作用

Revealing the roles of IL-7R in abdominal aortic aneurysm through integrated analysis of single-cell RNA-seq and bulk RNA-seq.

作者信息

Zhou Siyuan, Ju Shuai, Li Xiaoyan, Ruan Chengchao, Dong Zhihui

机构信息

Jinshan Hospital, Fudan University, Shanghai, China; Zhongshan Hospital, Fudan University, Shanghai, China.

Jinshan Hospital, Fudan University, Shanghai, China.

出版信息

Biochem Biophys Res Commun. 2024 Dec 31;741:151042. doi: 10.1016/j.bbrc.2024.151042. Epub 2024 Nov 21.

DOI:10.1016/j.bbrc.2024.151042
PMID:39586133
Abstract

Abdominal aortic aneurysm (AAA) is a common cardiovascular disease in the elderly, but there are still no therapeutic targets for this disease. In this study, we collected and analyzed bulk RNA sequencing (bulk RNA-seq) and single-cell RNA sequencing (scRNA-seq) data of AAA from the Gene Expression Omnibus (GEO) database. The immune infiltration-related genes were identified and categorized into various cell types, revealing potential key genes and pathways. Examination of three bulk RNA-seq datasets revealed a total of 4087 differentially expressed genes. The expression levels of the immune-related genes IL-7R were significantly elevated in AAA tissues across all three datasets. Furthermore, scRNA-Seq analysis revealed increased expression of IL-7R in CD4 memory cells within AAA tissues. Immunofluorescence staining corroborated these findings, demonstrating increased expression of IL-7R in CD4 T cells in AAA tissues. In vitro, activation of IL-7R elevated the activation of JAK/STAT pathway and phenotypic switching in SMCs, while inhibition of IL-7R abolished these effects and suppressed the secretion of IFN-γ. In conclusion, the activation of IL-7R in CD4 T cells is a key contributor to the pathogenesis of AAA, as it can promote secretion of IFN-γ via JAK/STAT pathway and induce phenotypic switching of SMCs.

摘要

腹主动脉瘤(AAA)是老年人常见的心血管疾病,但该病仍无治疗靶点。在本研究中,我们从基因表达综合数据库(GEO)收集并分析了AAA的批量RNA测序(bulk RNA-seq)和单细胞RNA测序(scRNA-seq)数据。对免疫浸润相关基因进行鉴定并分类到不同细胞类型中,揭示了潜在的关键基因和通路。对三个批量RNA-seq数据集的检测共发现4087个差异表达基因。在所有三个数据集中,AAA组织中免疫相关基因IL-7R的表达水平均显著升高。此外,scRNA-Seq分析显示AAA组织内CD4记忆细胞中IL-7R表达增加。免疫荧光染色证实了这些发现,表明AAA组织中CD4 T细胞中IL-7R表达增加。在体外,IL-7R的激活提高了JAK/STAT通路的激活以及平滑肌细胞(SMC)的表型转换,而抑制IL-7R则消除了这些效应并抑制了IFN-γ的分泌。总之,CD4 T细胞中IL-7R的激活是AAA发病机制的关键因素,因为它可通过JAK/STAT通路促进IFN-γ的分泌并诱导SMC的表型转换。

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