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揭示 : 非经典昆虫模型的生物钟转录组研究。

Uncovering the circadian transcriptome of : insights into a non-canonical insect model.

机构信息

Department of Evolutionary & Environmental Biology, Institute of Evolution, University of Haifa, Haifa 3498838, Israel.

出版信息

Proc Biol Sci. 2024 Nov;291(2035):20241848. doi: 10.1098/rspb.2024.1848. Epub 2024 Nov 27.

Abstract

The study of the circadian clock has greatly benefited from using as a model system. Yet accumulating evidence suggests that the fly might not be the canonical insect model. Here, I have analysed the circadian transcriptome of the jewel wasp by using RNA-seq in both constant darkness and constant light (in contrast to flies, the wasps are rhythmic under continuous light). I identify approximately 6% of the transcriptome as cycling under constant conditions, revealing a bimodal distribution of phases and low cycling amplitude. I examine the biological processes under circadian control in , identifying clock control of functions such as metabolism, light response and a variety of neural processes, drawing comparisons between and . Although there was little similarity between cycling genes in and , the functions fulfilled by cycling transcripts were similar in both species. Interestingly, of the known core clock genes, only , and showed significant cycling in , highlighting the potential diversity in molecular clock mechanisms across insect species.

摘要

利用 作为模型系统,对生物钟的研究受益匪浅。然而,越来越多的证据表明,这种昆虫可能不是典型的昆虫模型。在这里,我通过在持续光照下(与蝇类不同,蜂类在持续光照下具有节律性)使用 RNA-seq 技术,分析了宝石蜂的昼夜转录组。我发现约 6%的转录组在持续条件下呈周期性变化,相位呈双峰分布且循环幅度较低。我在 中检查了受生物钟控制的生物学过程,确定了时钟对代谢、光反应和各种神经过程等功能的控制作用,并在 和 之间进行了比较。尽管 和 中的循环基因之间几乎没有相似性,但两种物种中循环转录本所发挥的功能是相似的。有趣的是,在已知的 核心生物钟基因中,只有 、 和 在 中表现出显著的周期性,这突出表明了分子钟机制在昆虫物种中的多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c160/11610487/d85d7f069c2f/rspb.2024.1848.f001.jpg

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