Department of Biological Chemical Engineering, College of Chemical Engineering and Materials Science, Tianjin University of Science and Technology, Tianjin 300457, China.
National Research Foundation, Pretoria 0001, South Africa.
Int J Mol Sci. 2024 Nov 16;25(22):12316. doi: 10.3390/ijms252212316.
This study focuses on the characterization and re-engineering of glucose transport in β-galactosidase (BglD) to enhance its catalytic efficiency. Computational prediction methods were employed to identify key residues constituting access tunnels for lactose and glucose, revealing distinct pockets for both substrates. In silico simulated saturation mutagenesis of residues T215 and T473 led to the identification of eight mutant variants exhibiting potential enhancements in glucose transport. Site-directed mutagenesis at T215 and T473 resulted in mutants with consistently enhanced specific activities, turnover rates, and catalytic efficiencies. These mutants also demonstrated improved galactooligosaccharide (GOS) synthesis, yielding an 8.1-10.6% enhancement over wild-type BglD yield. Structural analysis revealed that the mutants exhibited transformed configurations and localizations of glucose conduits, facilitating expedited glucose release. This study's findings suggest that the re-engineered mutants offer promising avenues for enhancing BglD's catalytic efficiency and glucose translocation, thereby improving GOS synthesis. By-product (glucose) re-tunneling is a viable approach for enzyme tunnel engineering and holds significant promise for the molecular evolution of enzymes.
本研究专注于β-半乳糖苷酶(BglD)的葡萄糖转运特性和再工程化,以提高其催化效率。采用计算预测方法鉴定了构成乳糖和葡萄糖进入通道的关键残基,揭示了两种底物的不同口袋。对残基 T215 和 T473 进行计算机模拟饱和突变,鉴定出 8 种具有潜在增强葡萄糖转运能力的突变体。在 T215 和 T473 处进行定点突变,得到的突变体具有一致增强的比活性、周转率和催化效率。这些突变体还表现出改良的半乳糖低聚糖(GOS)合成能力,比野生型 BglD 的产量提高了 8.1-10.6%。结构分析表明,突变体表现出葡萄糖导管的转化构象和定位,促进了葡萄糖的快速释放。本研究的结果表明,经改造的突变体为提高 BglD 的催化效率和葡萄糖转运提供了有前途的途径,从而改善 GOS 的合成。副产物(葡萄糖)再隧道化是一种可行的酶隧道工程方法,对酶的分子进化具有重要意义。