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用于液体活检中miRNA检测的酶辅助电化学即时检测

Enzyme-Assisted Electrochemical Point-of-Care Test for miRNA Detection in Liquid Biopsy.

作者信息

Kalligosfyri Panagiota M, Cimmino Wanda, Normanno Nicola, Cinti Stefano

机构信息

Department of Pharmacy, University of Naples "Federico II", 80131 Naples, Italy.

IRCCS Istituto Romagnolo per lo Studio dei Tumori "Dino Amadori", 47014 Meldola, Italy.

出版信息

Anal Chem. 2024 Dec 10;96(49):19202-19206. doi: 10.1021/acs.analchem.4c04127. Epub 2024 Nov 27.

DOI:10.1021/acs.analchem.4c04127
PMID:39602323
Abstract

In the personalized medicine era, affordable and portable devices for quicker cancer monitoring, even in remote areas, are crucial. To address this need, we have developed an enzyme-assisted electrochemical point-of-care (POC) test for application toward liquid biopsy. In particular, miR-200a-5p has been taken into account as the model target due to its correlation for triple negative breast cancer (TNBC) prognosis. The proposed platform has been conceived as signal-ON, and the detection architecture is based on the presence of a duplex-specific nuclease (DSN) that is selective for DNA-RNA heteroduplexes. When the miRNA is recognized by an ad-hoc designed DNA probe, the DSN enzyme enables for the isothermal target recycling and signal enhancement, which is essential for detecting the miRNA trace in biofluids. Introducing a methylene blue (MB) modification on the DNA probe, a single miRNA strand is capable of triggering multiple DSN cleavage circles, increasing the free MB and thus the electrochemical signal recorded. All the optimization studies have been carried out using a screen-printed strip, resulting in a dynamic range comprised between 0.1 pM and 100 nM and a detection limit down to the fM level. A satisfactory selectivity was highlighted by interrogating the system toward random miRNA target mixtures, and the platform was also tested in spiked commercial serum samples.

摘要

在个性化医疗时代,即便在偏远地区,能够进行更快癌症监测的经济实惠且便于携带的设备至关重要。为满足这一需求,我们开发了一种酶辅助电化学即时检测(POC)方法用于液体活检。特别地,由于miR-200a-5p与三阴性乳腺癌(TNBC)预后相关,已将其作为模型靶点。所提出的平台被设计为信号开启型,检测架构基于对DNA-RNA异源双链具有选择性的双链特异性核酸酶(DSN)的存在。当miRNA被专门设计的DNA探针识别时,DSN酶能够实现等温靶标循环和信号增强,这对于检测生物流体中的miRNA痕量至关重要。在DNA探针上引入亚甲基蓝(MB)修饰后,单链miRNA能够触发多个DSN切割循环,增加游离MB,从而增强记录的电化学信号。所有优化研究均使用丝网印刷电极条进行,得到的动态范围为0.1 pM至100 nM,检测限低至fM水平。通过检测该系统对随机miRNA靶标混合物的情况突出显示了令人满意的选择性,并且该平台也在加标的商业血清样本中进行了测试。

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