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极化剂AsymPolPOK在完整和裂解的哺乳动物细胞中的稳定性。

Stability of the polarization agent AsymPolPOK in intact and lysed mammalian cells.

作者信息

Lagasca Dominique, Ghosh Rupam, Xiao Yiling, Frederick Kendra K

机构信息

Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390-8816.

Center for Alzheimer's and Neurodegenerative Disease, UT Southwestern Medical Center, Dallas, TX 75390.

出版信息

bioRxiv. 2024 Nov 11:2024.11.09.622814. doi: 10.1101/2024.11.09.622814.

DOI:10.1101/2024.11.09.622814
PMID:39605460
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11601236/
Abstract

Dynamic nuclear polarization (DNP) solid-state NMR enables detection of proteins at endogenous concentrations in cells through sensitivity enhancement from nitroxide biradical polarization agents. AsymPolPOK, a novel water-soluble asymmetric nitroxide biradical, offers superior sensitivity and faster build-up times compared to existing agents like AMUPol. Here, we characterize AsymPolPOK in mammalian HEK293 cells, examining its cellular distribution, reduction kinetics, and DNP performance. We demonstrate that electroporation achieves uniform cellular delivery of AsymPolPOK, including nuclear permeation, with no cytotoxicity at millimolar concentrations. However, the cellular environment rapidly reduces AsymPolPOK to its monoradical form, with one nitroxide center showing greater reduction resistance than the other. While AsymPolPOK maintains high DNP enhancements and short build-up times in lysates, its performance in intact cells depends critically on delivery method and exposure time to cellular constituents. Electroporation yields higher, more uniform enhancements compared to incubation, but prolonged exposure to the cellular environment diminishes DNP performance in both cases. These findings establish the potential of AsymPolPOK as a polarization agent for in-cell DNP NMR while highlighting the need for developing more bio-resistant polarization agents to further advance cellular structural biology studies.

摘要

动态核极化(DNP)固态核磁共振能够通过氮氧化物双自由基极化剂增强灵敏度,检测细胞内源性浓度的蛋白质。与AMUPol等现有试剂相比,新型水溶性不对称氮氧化物双自由基AsymPolPOK具有更高的灵敏度和更快的极化建立时间。在这里,我们对哺乳动物HEK293细胞中的AsymPolPOK进行了表征,研究了其细胞分布、还原动力学和DNP性能。我们证明,电穿孔可实现AsymPolPOK在细胞内的均匀递送,包括细胞核渗透,在毫摩尔浓度下无细胞毒性。然而,细胞环境会迅速将AsymPolPOK还原为其单自由基形式,其中一个氮氧化物中心比另一个显示出更高的还原抗性。虽然AsymPolPOK在裂解物中保持高DNP增强和短极化建立时间,但其在完整细胞中的性能关键取决于递送方法和与细胞成分的接触时间。与孵育相比,电穿孔产生更高、更均匀的增强效果,但在两种情况下,长时间暴露于细胞环境都会降低DNP性能。这些发现确立了AsymPolPOK作为细胞内DNP核磁共振极化剂的潜力,同时强调了开发更具生物抗性的极化剂以进一步推进细胞结构生物学研究的必要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/0d90045cc97b/nihpp-2024.11.09.622814v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/3b9fa73af73d/nihpp-2024.11.09.622814v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/7098a7f5c652/nihpp-2024.11.09.622814v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/6c7001d791b1/nihpp-2024.11.09.622814v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/0d90045cc97b/nihpp-2024.11.09.622814v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/3b9fa73af73d/nihpp-2024.11.09.622814v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/7098a7f5c652/nihpp-2024.11.09.622814v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/6c7001d791b1/nihpp-2024.11.09.622814v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ca0/11601236/0d90045cc97b/nihpp-2024.11.09.622814v1-f0004.jpg

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本文引用的文献

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Spatially resolved DNP-assisted NMR illuminates the conformational ensemble of α-synuclein in intact viable cells.空间分辨的动态核极化辅助核磁共振揭示了完整活细胞中α-突触核蛋白的构象集。
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