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与胰腺癌预后和肿瘤微环境相关的缺氧相关生物信息学特征:现状、关注点和未来展望。

Hypoxia-related bioinformatic signatures associated with prognosis and tumor microenvironment of pancreatic cancer: Current status, concerns, and future perspectives.

机构信息

Department of Gastric and Colorectal Surgery, General Surgery Center, The First Hospital of Jilin University, Changchun 130021, Jilin Province, China.

Department of Clinical Epidemiology, The First Hospital of Jilin University, Changchun 130021, Jilin Province, China.

出版信息

World J Gastroenterol. 2024 Nov 28;30(44):4689-4696. doi: 10.3748/wjg.v30.i44.4689.

DOI:10.3748/wjg.v30.i44.4689
PMID:39610772
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11580612/
Abstract

Pancreatic cancer (PC), a highly lethal tumor with nearly identical incidence and mortality rates, has become the sixth leading cause of cancer-related deaths. Hypoxia is an important malignant factor in PC, as it regulates angiogenesis, metabolic reprogramming, tumor progression, and metastasis. Disrupting the hypoxic microenvironment can enhance the efficacy of antitumor therapy and improve the prognosis of patients with PC. With the advent of bioinformatics, hypoxia-related PC models have emerged in recent years. They provide a reference for estimating the prognosis and immune microenvironment of patients with PC and identify potential biomarkers for targeting hypoxic microenvironment. However, these findings based on bioinformatic analysis may not be completely reliable without further experimental evidence and clinical cohort validation. The application of these models and biomarkers in clinical practice to predict survival time and develop anti hypoxic therapeutic strategies for patients with PC remains in its infancy. In this editorial, we review the current status of hypoxia-related prognostic models in PC, analyze their similarities and differences, discuss several existing challenges, and provide potential solutions and directions for further studies. This editorial will facilitate the optimization, validation, and determination of the molecular mechanisms of related models.

摘要

胰腺癌(PC)是一种致死率极高的肿瘤,其发病率和死亡率几乎相同,已成为第六大癌症相关死亡原因。缺氧是 PC 的一个重要恶性因素,它调节血管生成、代谢重编程、肿瘤进展和转移。破坏缺氧微环境可以提高抗肿瘤治疗的疗效,并改善 PC 患者的预后。随着生物信息学的出现,近年来出现了与缺氧相关的 PC 模型。它们为评估 PC 患者的预后和免疫微环境提供了参考,并确定了针对缺氧微环境的潜在生物标志物。然而,如果没有进一步的实验证据和临床队列验证,基于生物信息学分析的这些发现可能并不完全可靠。这些模型和生物标志物在预测 PC 患者生存时间和开发抗缺氧治疗策略方面在临床实践中的应用仍处于起步阶段。在这篇社论中,我们回顾了 PC 中与缺氧相关的预后模型的现状,分析了它们的异同,讨论了几个现有的挑战,并为进一步的研究提供了潜在的解决方案和方向。这篇社论将促进相关模型的优化、验证和分子机制的确定。

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Hypoxia-related bioinformatic signatures associated with prognosis and tumor microenvironment of pancreatic cancer: Current status, concerns, and future perspectives.与胰腺癌预后和肿瘤微环境相关的缺氧相关生物信息学特征:现状、关注点和未来展望。
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本文引用的文献

1
Construction and validation of a pancreatic cancer prognostic model based on genes related to the hypoxic tumor microenvironment.基于缺氧肿瘤微环境相关基因构建和验证胰腺癌预后模型。
World J Gastroenterol. 2024 Sep 28;30(36):4057-4070. doi: 10.3748/wjg.v30.i36.4057.
2
Alterations in genes involved in glycolysis and hypoxia affect the prognosis of pancreatic cancer.参与糖酵解和缺氧的基因改变影响胰腺癌的预后。
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Spatial transcriptome and single-cell reveal the role of nucleotide metabolism in colorectal cancer progression and tumor microenvironment.空间转录组和单细胞揭示核苷酸代谢在结直肠癌进展和肿瘤微环境中的作用。
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Machine learning reveals diverse cell death patterns in lung adenocarcinoma prognosis and therapy.机器学习揭示了肺腺癌预后和治疗中的多种细胞死亡模式。
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Combining single-cell sequencing and spatial transcriptome sequencing to identify exosome-related features of glioblastoma and constructing a prognostic model to identify BARD1 as a potential therapeutic target for GBM patients.联合单细胞测序和空间转录组测序鉴定胶质母细胞瘤中与外泌体相关的特征,并构建预后模型鉴定 BARD1 作为 GBM 患者的潜在治疗靶点。
Front Immunol. 2023 Aug 31;14:1263329. doi: 10.3389/fimmu.2023.1263329. eCollection 2023.
8
Novel prognostic gene signature for pancreatic ductal adenocarcinoma based on hypoxia.基于缺氧的胰腺导管腺癌新型预后基因特征。
World J Surg Oncol. 2023 Aug 22;21(1):257. doi: 10.1186/s12957-023-03142-2.
9
Integrated multiomics analysis and machine learning refine molecular subtypes and prognosis for muscle-invasive urothelial cancer.整合多组学分析和机器学习优化肌肉浸润性尿路上皮癌的分子亚型及预后。
Mol Ther Nucleic Acids. 2023 Jun 5;33:110-126. doi: 10.1016/j.omtn.2023.06.001. eCollection 2023 Sep 12.
10
A bioinformatics analysis and an experimental validation of the hypoxia-related prognostic model.缺氧相关预后模型的生物信息学分析与实验验证。
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