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原发性和转移性肾上腺皮质癌的全基因组分析揭示了重要的分子事件。

Whole genome profiling of primary and metastatic adrenocortical carcinoma unravels significant molecular events.

作者信息

Kalomeris Taylor, Assaad Majd Al, la Mora Jesus Delgado-de, Gundem Gunes, Levine Max F, Boyraz Baris, Manohar Jyothi, Sigouros Michael, Medina-Martínez Juan S, Sboner Andrea, Elemento Olivier, Scognamiglio Theresa, Mosquera Juan Miguel

机构信息

Department of Pathology and Laboratory Medicine, NewYork-Presbyterian Hospital/Weill Cornell Medical Center, 1300 York Ave, New York, NY 10065, USA.

Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, 1300 York Ave, New York, NY 10065, USA; Englander Institute for Precision Medicine, Weill Cornell Medicine, 413 East 69th Street, New York, NY 10021, USA.

出版信息

Pathol Res Pract. 2025 Feb;266:155725. doi: 10.1016/j.prp.2024.155725. Epub 2024 Nov 29.

Abstract

Adrenocortical carcinoma (ACC) is a rare, aggressive malignancy with limited treatment options and poor prognosis, with a 5-year survival rate of about 15 %. This study used whole genome sequencing to characterize the genomic landscape of five patients, one of them with both primary and metastatic samples. Key driver mutations were detected, including APC, JAK1, RFWD3 as well as other genes. Notably, a primary tumor harbored a RAD51 biallelic deleterious translocation, associated with homologous recombination deficiency signature. Large-scale copy neutral loss of heterozygosity (LOH) was identified in four tumors, three had TP53 mutations, with structural variants impacting genes as RB1, CDKN2A, and NF1. A genomic signature specific to mismatch repair was observed in a sample with MHS6 mutation. Two tumors presented novel fusions at TERT locus, including TERT::ZNF521. Comparative analysis between conventional and oncocytic ACC subtypes revealed no significant differences in mutation load, microsatellite instability, or specific gene enrichment. This comprehensive WGS analysis broadens the spectrum of genomic alterations in ACC, highlighting potential molecular targets and differences across subtypes that may inform future therapeutic strategies.

摘要

肾上腺皮质癌(ACC)是一种罕见的侵袭性恶性肿瘤,治疗选择有限且预后较差,5年生存率约为15%。本研究采用全基因组测序来描绘5例患者的基因组图谱,其中1例患者同时有原发和转移样本。检测到关键驱动突变,包括APC、JAK1、RFWD3以及其他基因。值得注意的是,一个原发性肿瘤存在RAD51双等位基因有害易位,与同源重组缺陷特征相关。在4个肿瘤中鉴定出大规模拷贝中性杂合性缺失(LOH),3个有TP53突变,结构变异影响RB1、CDKN2A和NF1等基因。在一个有MHS6突变的样本中观察到错配修复特异性的基因组特征。两个肿瘤在TERT基因座出现新的融合,包括TERT::ZNF521。传统型和嗜酸细胞型ACC亚型之间的比较分析显示,在突变负荷、微卫星不稳定性或特定基因富集方面无显著差异。这项全面的全基因组测序分析拓宽了ACC基因组改变的范围,突出了潜在的分子靶点以及亚型间的差异,这可能为未来的治疗策略提供依据。

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