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作为野生型、L858R/T790M和L858R/T790M/C797S表皮生长因子受体强效抑制剂的呋喃吡啶衍生物

Furopyridine Derivatives as Potent Inhibitors of the Wild Type, L858R/T790M, and L858R/T790M/C797S EGFR.

作者信息

Todsaporn Duangjai, Zubenko Alexander, Kartsev Victor G, Mahalapbutr Panupong, Geronikaki Athina, Sirakanyan Samvel N, Divaeva Lyudmila N, Chekrisheva Victoria, Yildiz Ilkay, Choowongkomon Kiattawee, Rungrotmongkol Thanyada

机构信息

Center of Excellence in Biocatalyst and Sustainable Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.

North-Caucasian Zonal Research Veterinary Institute, 346406 Novocherkassk, Russia.

出版信息

J Phys Chem B. 2024 Dec 19;128(50):12389-12402. doi: 10.1021/acs.jpcb.4c06246. Epub 2024 Dec 5.

Abstract

The treatment of patients with nonsmall cell lung cancer (NSCLC) using epidermal growth factor receptor (EGFR) inhibitors is complicated by drug-sensitive activating L858R/T790M and L858R/T790M/C797S mutations. To overcome drug resistance, a series of furopyridine (PD) compounds were virtually screened to identify potent EGFR inhibitors using molecular docking and molecular dynamics (MD) simulations based on the solvated interaction energy (SIE) method. Several PD compounds identified from virtual screening demonstrated the potential to suppress both wild-type and mutant forms of EGFR, with IC values in the nanomolar range. Among these, and exhibited highly potent inhibitory activity against both wild-type and mutant forms of EGFR, surpassing the efficacy of known drugs. Additionally, both PD compounds were cytotoxic to NSCLC cell lines (A549 and H1975) while being nontoxic to normal cell lines (Vero). The interaction mechanisms of both PD compounds complexed with wild-type and mutant forms of EGFR were elucidated through 500 ns molecular dynamics simulations. The predicted binding affinity from molecular mechanics/Poisson-Boltzmann surface area (MM/PBSA) correlated well with the experimental binding affinity derived from IC values. Furthermore, it was observed that van der Waals interactions, rather than electrostatic interactions, played a significant role in interacting with EGFR's active site. The strong inhibitory activity against EGFR was attributed to two key residues, M793 and S797, via hydrogen bonding, corresponding with lower solvent accessibility and a higher number of atomic contacts. Therefore, these potent compounds could be developed as promising drugs targeting both wild-type and mutant EGFR for the treatment of NSCLC.

摘要

使用表皮生长因子受体(EGFR)抑制剂治疗非小细胞肺癌(NSCLC)患者时,会因药物敏感的激活型L858R/T790M和L858R/T790M/C797S突变而变得复杂。为了克服耐药性,基于溶剂化相互作用能(SIE)方法,通过分子对接和分子动力学(MD)模拟对一系列呋吡啶(PD)化合物进行了虚拟筛选,以鉴定有效的EGFR抑制剂。从虚拟筛选中鉴定出的几种PD化合物显示出抑制野生型和突变型EGFR的潜力,其IC值在纳摩尔范围内。其中,[具体化合物名称1]和[具体化合物名称2]对野生型和突变型EGFR均表现出高效抑制活性,超过了已知药物的疗效。此外,这两种PD化合物对NSCLC细胞系(A549和H1975)具有细胞毒性,而对正常细胞系(Vero)无毒。通过500纳秒的分子动力学模拟阐明了这两种PD化合物与野生型和突变型EGFR复合的相互作用机制。分子力学/泊松-玻尔兹曼表面积(MM/PBSA)预测的结合亲和力与从IC值得出的实验结合亲和力相关性良好。此外,观察到范德华相互作用而非静电相互作用在与EGFR活性位点的相互作用中起重要作用。对EGFR的强抑制活性归因于通过氢键作用的两个关键残基M793和S797,这与较低的溶剂可及性和较多的原子接触数相对应。因此,这些强效化合物有望开发成为针对野生型和突变型EGFR治疗NSCLC的有前景的药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1fb5/11664582/597f87fb8604/jp4c06246_0001.jpg

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