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从韩国(鳞翅目:夜蛾科)肠道中分离出的[物种名称]菌株的全基因组序列数据。 (注:原文中“sp.”后缺少具体物种名,这里按字面翻译,实际翻译时应补充完整物种名才能准确表意)

Whole genome sequence data of sp. strain isolated from gut of (Lepidoptera: Noctuidae) in South Korea.

作者信息

Kim Jihoon, Nam Kyong-Hee, Lee Jun-Woo, Chun Seong-Jun

机构信息

LMO Team, National Institute of Ecology, 1210 Geumgang-ro, Maseo-myeon, Seocheon 33657, Republic of Korea.

Department of Biology, Wonkwang University, 460 Iksan-daero, Iksan, Republic of Korea.

出版信息

Data Brief. 2024 Nov 12;57:111127. doi: 10.1016/j.dib.2024.111127. eCollection 2024 Dec.

Abstract

(Lepidoptera: Noctuidae), commonly referred to as the cotton leafworm, is a widespread herbivorous pest found in both tropical and temperate regions. We isolated a novel bacterium, sp. and performed whole genome sequencing using the Illumina HiSeq X. Strain SE-J8 is a novel GC-rich bacterium isolated from the gut of in South Korea. The genome consists of 53 contigs with a total size of 3,332,109 bp, an N50 of 117,772 bp, and a GC% of 71.5 %. The annotation predicted a total of 3144 protein-coding genes and 55 RNA genes, which were classified under 230 subsystems. One third of the subsystems was predominantly associated with the metabolism of proteins, amino acids, and their derivatives. The strain has been deposited in the Korean Culture Center of Microorganisms (KCCM) under the accession number KCCM 43469, and the Japan Collection of Microorganisms (JCM) under the accession number JCM 36272. The draft genome sequence data have been submitted to the National Center for Biotechnology Information (NCBI) (Bioproject ID Accession Number: PRJNA983434; Biosample ID Accession Number: SAMN35725676; GenBank: GCA_030345695.1; https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_030345695.1/).

摘要

(鳞翅目:夜蛾科),通常被称为棉叶虫,是一种在热带和温带地区都有分布的广泛存在的食草害虫。我们分离出一种新型细菌,[细菌名称]菌株,并使用Illumina HiSeq X进行了全基因组测序。SE-J8菌株是从韩国[宿主名称]肠道中分离出的一种新型富含GC的细菌。该基因组由53个重叠群组成,总大小为3332109 bp,N50为117772 bp,GC含量为71.5%。注释预测共有3144个蛋白质编码基因和55个RNA基因,它们被归类到230个子系统中。其中三分之一的子系统主要与蛋白质、氨基酸及其衍生物的代谢相关。该菌株已保藏于韩国微生物培养中心(KCCM),保藏编号为KCCM 43469,以及日本微生物保藏中心(JCM),保藏编号为JCM 36272。基因组草图序列数据已提交至美国国立生物技术信息中心(NCBI)(生物项目ID登录号:PRJNA983434;生物样本ID登录号:SAMN35725676;GenBank:GCA_030345695.1;https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_030345695.1/)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d292/11617982/09c58156b97d/gr1.jpg

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