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揭示山楂中表儿茶素没食子酸酯在靶向异常心脏Ca2+信号蛋白方面的潜力:心力衰竭治疗的深入研究

Unraveling the potential of Epicatechin gallate from crataegus oxyacantha in targeting aberrant cardiac Ca2+ signalling proteins: an in-depth investigation for heart failure therapy.

作者信息

Praveen J, Anusuyadevi M, Jayachandra K S

机构信息

Department of Bioinformatics, Bharathidasan University, Tiruchirappalli, Tamilnadu, India.

Department of Biochemistry, Bharathidasan University, Tiruchirappalli, Tamilnadu, India.

出版信息

J Biomol Struct Dyn. 2024 Dec 8:1-15. doi: 10.1080/07391102.2024.2435624.

Abstract

The cardiovascular sarcoplasmic reticulum (SR) calcium (Ca2+) ATPase is an imperative determinant of cardiac functionality. In addition, anomalies in Ca2+ handling protein and atypical energy metabolism are inherent in heart failure (HF). Moreover, Ca2+ overload in SR leads to mitochondrial matrix Ca2+ overload, which can trigger the generation of Reactive Oxygen Species (ROS), culminating in the triggering of the Permeability Transition Pore (PTP) and Cytochrome C release, resulting in apoptosis that leads to arrhythmias and numerous disorders. Although proteins involved in the molecular mechanism of Ca2+ dysfunction regarding mitochondrial dysfunction remains elusive, this study aims to assess the major Ca2+ handling proteins which may be involved in the Ca2+ malfunction that causes mitochondrial dysfunction and predicting the most effective drug by targeting the analyzed Ca2+ handling proteins through various analyses. Thirteen proteins absorbed from interaction analysis were docked with four optimal phytochemicals from (COC). Furthermore, The ADME profile of tyramine, vitexin, Epicatechin, and Epicatechin gallate was acclimated to evaluate potential drugability utilizing QikProp. So, molecular docking evaluations were performed using Glide (Maestro), autodock, and vina. Based on the results of 156 dockings by Maestro, auto-dock, and auto-dock vina, PKAC-a with Epicatechin gallate exhibits good interaction. Therefore, a 2000 ns molecular dynamics (MD) simulation was utilized to assess the feasible phytochemical Epicatechin gallate - PKAC-a complex binding stability utilizing Desmond and this study confirmed that Epicatechin gallate from COC has high possibilities to inhibit the aberrant cardiac Ca2+ signaling proteins due to its conformational rigidity.

摘要

心血管肌浆网(SR)钙(Ca2+)ATP酶是心脏功能的一个重要决定因素。此外,Ca2+处理蛋白异常和非典型能量代谢是心力衰竭(HF)的固有特征。此外,SR中的Ca2+过载会导致线粒体基质Ca2+过载,进而引发活性氧(ROS)的产生,最终触发通透性转换孔(PTP)和细胞色素C释放,导致细胞凋亡,进而引发心律失常和许多疾病。尽管与线粒体功能障碍相关的Ca2+功能障碍分子机制中涉及的蛋白质仍不清楚,但本研究旨在评估可能参与导致线粒体功能障碍的Ca2+功能异常的主要Ca2+处理蛋白,并通过各种分析针对所分析的Ca2+处理蛋白预测最有效的药物。从相互作用分析中吸收的13种蛋白质与来自(COC)的四种最佳植物化学物质进行对接。此外,对酪胺、牡荆素、表儿茶素和表儿茶素没食子酸酯的ADME特性进行了调整,以利用QikProp评估潜在的药物可及性。因此,使用Glide(Maestro)、自动对接和vina进行分子对接评估。根据Maestro、自动对接和自动对接vina的156次对接结果,PKAC-a与表儿茶素没食子酸酯表现出良好的相互作用。因此,利用Desmond进行了2000纳秒的分子动力学(MD)模拟,以评估可行的植物化学物质表儿茶素没食子酸酯-PKAC-a复合物的结合稳定性,本研究证实,来自COC的表儿茶素没食子酸酯因其构象刚性而极有可能抑制异常的心脏Ca2+信号蛋白。

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