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对《 obscurin 的激酶结构域与细胞间粘附蛋白相互作用》的修正

Correction to "The kinase domains of obscurin interact with intercellular adhesion proteins".

出版信息

FASEB J. 2024 Dec 15;38(23):e70237. doi: 10.1096/fj.202402994.

Abstract

Hu, L.-Y.R. and Kontrogianni-Konstantopoulos, A. (2013), The kinase domains of obscurin interact with intercellular adhesion proteins. The FASEB Journal, 27: 2001-2012. https://doi.org/10.1096/fj.12-221317 The journal was informed of possible duplicated areas in portions of lanes 3-5 in Figure 2G, which include negative controls and therefore contain no signal. The authors provided replicate original autoradiograms showing similar findings to the published Figure 2G. The conclusions of Figure 2G and the study did not change. The journal was informed of possible similarities in Sypro Ruby stained lane 2 of Figures 2E and 4D, labeled "N.I. Lysates +/Purified SK2 -" and "N.I. Lysates +/Purified SK1 -", respectively, which are negative controls and therefore contain no signal. The authors were not able to retrieve the original Sypro Ruby stained images shown in Figures 2E and 4D but provided Coomassie Blue (Figure 2E) and Western blotting (Figure 4D) assays of the relevant samples showing the same results. The conclusions of Figures 2E, 4D, and the entire study did not change. The corrected Figure 2 is as follows: FIGURE 2. N-cadherin is a substrate of SK2. (A, B) Schematic diagrams illustrating the SK2 bait (A) and N-cadherin prey (B) constructs. αC, α-helix C; AS, activation segment; CDR, extracellular cadherin repeats; CL, catalytic loop; I, intracellular domain; NB, nucleotide binding domain; PRO, prodomain; TM, transmembrane region. (C) Identification of minimal interacting domains using the Y2H system; relative strength of the identified interactions is indicated by + and - symbols. (D, D') Fluorescent (D) and bright field (D') images obtained from the PLA assay. Scale bar = 30 μm. (E) Purified His-tagged SK2 protein analyzed by SDS-PAGE and stained with Coomassie Brilliant Blue-R250. (F) Purified control GST-protein and recombinant N-cadherin peptides fused to GST separated by SDS-PAGE and stained with Coomassie Brilliant Blue-R250. (G) Autoradiogram of an in vitro kinase assay using His-tagged SK2 and different substrates; bands denoted as P-SK2 and PP-SK2 represent SK2 species autophosphorylated to different extents. FIGURE 4. A small obscurin kinase isoform undergoes glycosylation. (A-C) Adult mouse heart lysates were incubated with lectin resins. Eluted fractions were immunoprobed for the presence of giant obscurin-B (A) or smaller obscurin kinase isoforms prior to (B, top panel) and after (C) treatment with PNGase F glycosidase. Protein lysates were also treated with PNGase F before they were applied to the lectin resin (B, bottom panel); ME and SE, elution buffers (see Materials and Methods), El1 and El2, eluted fractions 1 and 2. (D) Purified His-tagged SK1 protein analyzed by SDS-PAGE and Western blotting (WB) assay probed with the ObscKin3 antibody. (E) Purified control GST-protein and recombinant NKA 1 peptide fused to GST, separated by SDS-PAGE, and stained with Coomassie Brilliant Blue-R250. (F) Autoradiogram of an in vitro kinase assay using His-tagged SK1 and different substrates; bands marked as P-SK1 represent autophosphorylated species of SK1. Notably, the autophosphorylation activity of SK1 is significantly diminished in the presence of recombinant NKA 1, possibly due to direct binding of the latter to the catalytic part of the former, as our Y2H results indicated.

摘要

胡,L.-Y.R. 和孔特罗吉安尼 - 康斯坦托普洛斯,A.(2013年), obscurin的激酶结构域与细胞间粘附蛋白相互作用。《美国实验生物学会联合会杂志》,27: 2001 - 2012。https://doi.org/10.1096/fj.12 - 221317 该期刊被告知图2G中第3 - 5泳道部分可能存在重复区域,其中包括阴性对照,因此不含信号。作者提供了重复的原始放射自显影片,显示出与已发表的图2G相似的结果。图2G的结论以及该研究未改变。该期刊被告知图2E和4D的Sypro Ruby染色第2泳道可能存在相似性,分别标记为“N.I. 裂解物 +/纯化的SK2 -”和“N.I. 裂解物 +/纯化的SK1 -”,它们是阴性对照,因此不含信号。作者无法获取图2E和4D中所示的原始Sypro Ruby染色图像,但提供了相关样品的考马斯亮蓝(图2E)和蛋白质印迹(图4D)分析,显示出相同的结果。图2E、4D以及整个研究的结论未改变。校正后的图2如下:图2. N - 钙黏蛋白是SK2的底物。(A,B)示意图,展示了SK2诱饵(A)和N - 钙黏蛋白猎物(B)构建体。αC,α - 螺旋C;AS,激活区段;CDR,细胞外钙黏蛋白重复序列;CL,催化环;I,细胞内结构域;NB,核苷酸结合结构域;PRO,前结构域;TM,跨膜区域。(C)使用酵母双杂交系统鉴定最小相互作用结构域;所鉴定相互作用的相对强度用 + 和 - 符号表示。(D,D')从蛋白质邻近连接分析(PLA)获得的荧光(D)和明场(D')图像。比例尺 = 30μm。(E)通过SDS - PAGE分析并用考马斯亮蓝 - R250染色的纯化His标签SK2蛋白。(F)通过SDS - PAGE分离并用考马斯亮蓝 - R250染色的纯化对照GST蛋白和与GST融合的重组N - 钙黏蛋白肽。(G)使用His标签SK2和不同底物的体外激酶分析的放射自显影片;标记为P - SK2和PP - SK2的条带代表不同程度自磷酸化的SK2物种。图4. 一种小的obscurin激酶同工型发生糖基化。(A - C)成年小鼠心脏裂解物与凝集素树脂孵育。洗脱级分在用PNGase F糖苷酶处理之前(B,上图)和之后(C)针对巨型obscurin - B(A)或较小的obscurin激酶同工型的存在进行免疫印迹。蛋白质裂解物在应用于凝集素树脂之前也用PNGase F处理(B,下图);ME和SE,洗脱缓冲液(见材料与方法),El1和El2,洗脱级分1和2。(D)通过SDS - PAGE分析并用ObscKin3抗体进行蛋白质印迹(WB)分析的纯化His标签SK1蛋白。(E)通过SDS - PAGE分离并用考马斯亮蓝 - R250染色的纯化对照GST蛋白和与GST融合的重组NKA 1肽。(F)使用His标签SK1和不同底物的体外激酶分析的放射自显影片;标记为P - SK1的条带代表SK1的自磷酸化物种。值得注意的是,在重组NKA 1存在下,SK1的自磷酸化活性显著降低,这可能是由于后者直接与前者的催化部分结合,正如我们的酵母双杂交结果所示。

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