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人源环状RNA Hsa_Circ_0105596/脂肪量和肥胖相关蛋白通过吸附微小RNA-187-3p和调节真核生物延伸因子2来抑制帕金森病的进展。

Hsa_Circ_0105596/FTO inhibits progression of Parkinson's disease by sponging miR-187-3p and regulating eEF2.

作者信息

Feng Jiahao, Zhao Jin, Kuang Yong, Zhou Yuheng, Ye Ziheng, He Yutong, Chen Dandan, Zhang Li, Zhang Tingying, Zhu Qingqing, Cheng Shumin, Liu Taoli

机构信息

Traditional Chinese Medicine Department, The Seventh Affiliated Hospital of Sun Yat-sen University, Shenzhen, 518000, China.

Digestive Disease Center, The Seventh Affiliated Hospital of Sun Yat-sen University, Shenzhen, 518000, China.

出版信息

Heliyon. 2024 Nov 2;10(23):e39830. doi: 10.1016/j.heliyon.2024.e39830. eCollection 2024 Dec 15.

Abstract

BACKGROUND

Parkinson's disease (PD) characterized by inflammation and protein erroneous deposition, whose pathological mechanisms have not been elucidated. NcRNA plays important role in PD, especially when circRNA sponges miRNA, which leads to the breakdown of downstream regulation. The aim of this study is to investigate the dynamic changes between upregulated circRNA and downregulated miRNA during the pathogenesis of PD and their impact on downstream miRNA targets.

METHOD

We conducted bioinformatics on sequencing data of substantia nigra (SN) and striatum, and intersected differentially expressed genes (Degs) to determine core role of circFTO-miR-187-3p-EEF2 axes in the progression of PD. Firstly, therapeutic effect of knock-down circFTO in PD and its impact on EEF2 were determined in mouse, using immunohistochemistry, HE, Nissl, TUNEL staining and Western blot (WB). Targeted binding relationship between circFTO, miR-187-3p, and EEF2 was determined through RNA binding protein immunoprecipitation assays (RIP) and dual luciferase reporter assay. The significance of gene in apoptosis was confirmed through flow cytometry, lentiviral transduction, quantitative real-time PCR, and WB.

RESULT

CircFTO is upregulated and miR-187-3p is downregulated in SN of PD. EEF2 was the core of neural repair related modules in both SN and striatum using Weighted Correlation Network Analysis (WGCNA) and protein-protein interaction (PPI). The binding regulation relationship between circFTO-miR-187-3p-EEF2 was determined through structural analysis, RIP, and dual luciferase reporter assay. After knocking-down circFTO, animals showed alleviated symptoms, decreased levels of oxidative stress and EEF2. Upregulation of miR-187-3p or si-circFTO in SH-SY5Y cells can reduce cell apoptosis, EEF2, and oxidative stress. Moreover, individual interference with EEF2 can partially counteract the induction of 6-OHDA on apoptosis.

CONCLUSION

Excessive circFTO sponging miR-187-3p leads to the inability of miR-187-3p to effectively regulate expression of EEF2, resulting in the progression of PD. Moreover, interference with circFTO can effectively reduce brain inflammation and oxidative stress.

摘要

背景

帕金森病(PD)以炎症和蛋白质错误沉积为特征,其病理机制尚未阐明。非编码RNA(ncRNA)在PD中起重要作用,尤其是当环状RNA(circRNA)吸附微小RNA(miRNA)时,会导致下游调控失效。本研究旨在探讨PD发病过程中上调的circRNA与下调的miRNA之间的动态变化及其对下游miRNA靶标的影响。

方法

我们对黑质(SN)和纹状体的测序数据进行生物信息学分析,并对差异表达基因(Degs)进行交叉分析,以确定circFTO-miR-187-3p-EEF2轴在PD进展中的核心作用。首先,在小鼠中使用免疫组织化学、苏木精-伊红(HE)染色、尼氏染色、TUNEL染色和蛋白质免疫印迹法(WB)确定敲低circFTO对PD的治疗效果及其对EEF2的影响。通过RNA结合蛋白免疫沉淀试验(RIP)和双荧光素酶报告基因试验确定circFTO、miR-187-3p和EEF2之间的靶向结合关系。通过流式细胞术、慢病毒转导、定量实时聚合酶链反应和WB证实基因在细胞凋亡中的意义。

结果

在PD的SN中,circFTO上调而miR-187-3p下调。使用加权基因共表达网络分析(WGCNA)和蛋白质-蛋白质相互作用(PPI),EEF2是SN和纹状体中神经修复相关模块的核心。通过结构分析、RIP和双荧光素酶报告基因试验确定了circFTO-miR-187-3p-EEF2之间的结合调控关系。敲低circFTO后,动物症状减轻,氧化应激水平和EEF2水平降低。在SH-SY5Y细胞中上调miR-187-3p或干扰circFTO可减少细胞凋亡、EEF2和氧化应激。此外,单独干扰EEF2可部分抵消6-羟基多巴胺(6-OHDA)对细胞凋亡的诱导作用。

结论

过量的circFTO吸附miR-187-3p导致miR-187-3p无法有效调控EEF2的表达,从而导致PD进展。此外,干扰circFTO可有效减轻脑部炎症和氧化应激。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d7d/11626004/8ef101f4d4b0/gr1.jpg

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