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蔷薇科1861年(学名:Miq 1861)植物的叶绿体全基因组及系统发育分析

The complete chloroplast genome and phylogenetic analysis of Miq 1861 (Roseaceae).

作者信息

Guo Wei, Wang Longyuan, Wu Wei

机构信息

College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, Guangdong, China.

出版信息

Mitochondrial DNA B Resour. 2024 Dec 7;9(12):1669-1673. doi: 10.1080/23802359.2024.2438277. eCollection 2024.

Abstract

The wild raspberry species Miq 1861 is a promising resource for breeding thermotolerant cultivars. Its complete chloroplast genome spans 155,935 base pairs (bp), featuring the classic quadripartite structure: an 18,729 bp small single-copy region, an 85,662 bp large single-copy region, and two 25,772 bp inverted repeats. A total of 130 genes were identified, including 86 protein-coding, 36 tRNA genes, and 8 rRNA genes. A maximum likelihood phylogenetic tree based on chloroplast genomes shows that , within the subgenus , is sister to the subgenus . This confirms the polyphyletic nature of the subgenus . The chloroplast genome assembly of enhances our understanding of its evolutionary history.

摘要

野生悬钩子物种Miq 1861是培育耐热品种的一个有前景的资源。其完整的叶绿体基因组跨度为155,935个碱基对(bp),具有典型的四分体结构:一个18,729 bp的小单拷贝区域、一个85,662 bp的大单拷贝区域以及两个25,772 bp的反向重复序列。总共鉴定出130个基因,包括86个蛋白质编码基因、36个tRNA基因和8个rRNA基因。基于叶绿体基因组构建的最大似然系统发育树表明,在亚属内, 是亚属的姐妹群。这证实了亚属的多系性质。 的叶绿体基因组组装增强了我们对其进化历史的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c5d5/11626868/009d0e901c76/TMDN_A_2438277_F0001_C.jpg

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