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PRMT5在肺癌预后及离子通道特征方面的综合研究。

A comprehensive investigation of PRMT5 in the prognosis and ion channel features of lung cancer.

作者信息

Wang Yan, Chu Daifang, Li Haichao, Fan Jiangjiang, Zhu Ximing, Ma Yulong, Gu Zhongping, Xie Nianlin, Jing Pengyu

机构信息

Department of Thoracic Surgery, The Second Affiliated Hospital, Air Force Medical University, Xi'an, China.

Department of Pulmonary and Critical Care Medicine, The Second Affiliated Hospital, Air Force Medical University, Xi'an, China.

出版信息

Front Oncol. 2024 Nov 29;14:1478672. doi: 10.3389/fonc.2024.1478672. eCollection 2024.

Abstract

The increasing incidence and mortality associated with lung cancer (LC) is a significant global health challenge. The underlying mechanisms contributing to LC remain inadequately understood. However, emerging evidence suggests that the epigenetic modifier protein arginine methyltransferase 5 (PRMT5) plays a complex role in various cellular processes, including DNA repair, gene transcription, and alternative splicing, through its function in catalyzing the symmetric dimethylation of both histone and non-histone proteins. In this study, we examined the functional role of PRMT5 utilizing LC-related datasets (GSE30219, GSE50081, and TCGA LC cohort) through a series of analyses. Our findings revealed that PRMT5 was significantly overexpressed in LC samples compared to normal tissues and was correlated with overall survival and disease-free survival rates. Additionally, PRDM1 was identified as a key protein exhibiting a strong interaction with PRMT5. The prognostic model that integrated PRMT5 with clinical factors demonstrated robust performance in assessing survival outcomes. Elevated levels of PRMT5 were associated with poor prognosis in LC, as evidenced by analyses of the GSE30219, GSE50081, and TCGA-LC datasets. Furthermore, we identified 27 ion channel (IC) genes exhibited a correlation with PRMT5 in lung adenocarcinoma (LUAD), of which 9 genes were identified as statistically significant with KM survival analysis. Strikingly, all of the 9 genes, including LRRC8A, the same as PRMT5, were associated with poor prognosis in LUAD. Our research highlights the potential of PRMT5 as a novel prognostic biomarker and its relationship with IC genes in LC.

摘要

肺癌(LC)发病率和死亡率的不断上升是一项重大的全球健康挑战。导致肺癌的潜在机制仍未得到充分理解。然而,新出现的证据表明,表观遗传修饰蛋白精氨酸甲基转移酶5(PRMT5)通过催化组蛋白和非组蛋白的对称二甲基化,在包括DNA修复、基因转录和可变剪接在内的各种细胞过程中发挥复杂作用。在本研究中,我们通过一系列分析,利用与肺癌相关的数据集(GSE30219、GSE50081和TCGA肺癌队列)研究了PRMT5的功能作用。我们的研究结果显示,与正常组织相比,PRMT5在肺癌样本中显著过表达,并且与总生存率和无病生存率相关。此外,PRDM1被确定为与PRMT5有强烈相互作用的关键蛋白。将PRMT5与临床因素相结合的预后模型在评估生存结果方面表现出强大的性能。对GSE30219、GSE50081和TCGA-LC数据集的分析表明,PRMT5水平升高与肺癌预后不良相关。此外,我们在肺腺癌(LUAD)中鉴定出27个离子通道(IC)基因与PRMT5相关,其中9个基因经KM生存分析确定具有统计学意义。令人惊讶的是,这9个基因,包括与PRMT5相同的LRRC8A,均与LUAD的不良预后相关。我们的研究突出了PRMT5作为一种新型预后生物标志物的潜力及其与肺癌中IC基因的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d0b/11638061/01c5382f3522/fonc-14-1478672-g001.jpg

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