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通过泛素过表达方法阐明泛素相关功能

Elucidation of Ubiquitin-Related Functions via an Ubiquitin Overexpression Approach.

作者信息

Masuda Ryo, Yoshikawa Munetaka, Moriuchi Ryota, Oba Yumiko, Dohra Hideo, Kimura Yoko

机构信息

Graduate School of Integrated Science and Technology, Shizuoka University, Shizuoka 422-8529, Japan.

Shizuoka Instrumental Analysis Center, Shizuoka University, Shizuoka 422-8529, Japan.

出版信息

Cells. 2024 Dec 5;13(23):2011. doi: 10.3390/cells13232011.

DOI:10.3390/cells13232011
PMID:39682759
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11639773/
Abstract

To identify new ubiquitin-related functions using yeast, we searched for mutants conferring a temperature-sensitivity phenotype that could be rescued through ubiquitin overexpression. Screening of mutants using this overexpression strategy identified , which encodes a subunit of the endoplasmic reticulum (ER) signal peptidase complex (SPC). Ubiquitin overexpression rescued a high-temperature sensitivity of deletion mutant, suggesting that ubiquitin could compensate for Spc2 loss-of-function at high temperatures. The double mutant of Spc2 and Hrd1, an ER E3 ubiquitin ligase, showed a synergistic growth defect at higher temperatures. A weak genetic interaction was also observed between spc2Δ and mutation. The results suggest a close functional relationship between SPC and the ubiquitin-proteasome system in yeast and further provide proof-of-principle for this ubiquitin overexpression approach to identify novel ubiquitin-related genes and associated cellular processes.

摘要

为了利用酵母鉴定新的泛素相关功能,我们寻找了能赋予温度敏感表型且可通过泛素过表达得以挽救的突变体。使用这种过表达策略筛选突变体时,鉴定出了 ,它编码内质网(ER)信号肽酶复合物(SPC)的一个亚基。泛素过表达挽救了 缺失突变体的高温敏感性,这表明泛素可以在高温下补偿Spc2功能的丧失。Spc2和内质网E3泛素连接酶Hrd1的双突变体在较高温度下表现出协同生长缺陷。在spc2Δ和 突变之间也观察到了微弱的遗传相互作用。结果表明酵母中SPC与泛素 - 蛋白酶体系统之间存在密切的功能关系,并进一步为这种泛素过表达方法鉴定新的泛素相关基因及相关细胞过程提供了原理证明。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/f8a05cd1360f/cells-13-02011-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/3e58b3d48acc/cells-13-02011-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/2a6616a7250f/cells-13-02011-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/7dac0bc37b5d/cells-13-02011-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/f8a05cd1360f/cells-13-02011-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/3e58b3d48acc/cells-13-02011-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/2a6616a7250f/cells-13-02011-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/7dac0bc37b5d/cells-13-02011-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a42f/11639773/f8a05cd1360f/cells-13-02011-g004.jpg

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本文引用的文献

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The human signal peptidase complex acts as a quality control enzyme for membrane proteins.人信号肽酶复合体能作为膜蛋白的质量控制酶。
Science. 2022 Dec 2;378(6623):996-1000. doi: 10.1126/science.abo5672. Epub 2022 Dec 1.
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Structural basis of ER-associated protein degradation mediated by the Hrd1 ubiquitin ligase complex.Hrd1 泛素连接酶复合物介导的内质网相关蛋白降解的结构基础。
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Endoplasmic reticulum quality control by garbage disposal.内质网质量控制的垃圾处理。
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Accelerated invagination of vacuoles as a stress response in chronically heat-stressed yeasts.作为慢性热应激酵母的应激反应,液泡加速内陷。
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Ubiquitin- and ATP-dependent unfoldase activity of P97/VCP•NPLOC4•UFD1L is enhanced by a mutation that causes multisystem proteinopathy.P97/VCP•NPLOC4•UFD1L 的泛素和 ATP 依赖性展开酶活性可被导致多系统蛋白病的突变增强。
Proc Natl Acad Sci U S A. 2017 May 30;114(22):E4380-E4388. doi: 10.1073/pnas.1706205114. Epub 2017 May 16.
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Molecular Mechanism of Substrate Processing by the Cdc48 ATPase Complex.Cdc48 ATP酶复合体进行底物加工的分子机制
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The evolving role of ubiquitin modification in endoplasmic reticulum-associated degradation.泛素修饰在内质网相关降解中的演变作用。
Biochem J. 2017 Feb 15;474(4):445-469. doi: 10.1042/BCJ20160582.
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Ubiquitin modifications.泛素修饰
Cell Res. 2016 Apr;26(4):399-422. doi: 10.1038/cr.2016.39. Epub 2016 Mar 25.
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Ubiquitin chain diversity at a glance.泛素链多样性一览。
J Cell Sci. 2016 Mar 1;129(5):875-80. doi: 10.1242/jcs.183954. Epub 2016 Feb 15.
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Conserved Mode of Interaction between Yeast Bro1 Family V Domains and YP(X)nL Motif-Containing Target Proteins.酵母Bro1家族V结构域与含YP(X)nL基序的靶蛋白之间保守的相互作用模式。
Eukaryot Cell. 2015 Oct;14(10):976-82. doi: 10.1128/EC.00091-15. Epub 2015 Jul 6.