Ayala Schimpf Alan Rolando, Ortellado Laura Ester, Gamarra Marcelo Daniel, Fonseca María Isabel, Zapata Pedro Darío
Laboratorio de Biotecnología Molecular, Instituto de Biotecnología de Misiones "Dra. Maria Ebe Reca" (InBioMis), Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones, Posadas 3300, Misiones, Argentina.
Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires C1425FQB, Argentina.
Int J Mol Sci. 2024 Nov 22;25(23):12527. doi: 10.3390/ijms252312527.
Enzymes secreted by white rot fungi (WRF), such as laccase, offer a promising approach for the treatment of hazardous xenobiotic compounds. This study conducted a comprehensive analysis of the impact of the pesticides 2,4-dichlorophenoxyacetic acid (2,4-D) and chlorpyrifos on the laccase of BAFC 633 through in vitro and bioinformatics analyses. The fungal strain was shown to be tolerant to both pesticides, with notable morphological and ultrastructural alterations in the mycelium. Laccase activity and two isoenzymes (53 and 70 kDa) were detected in all initial treatments. The laccase was concentrated for subsequent catalytic evaluation in the presence of both pesticides, showing high stability at a pH of 3.6 and a temperature range of 50-60 °C. The gene, corresponding to this laccase, was modeled, and its structure revealed a defined catalytic pocket validated with a drug score of 0.61. Molecular docking estimated affinity energies of -5.06 and -9.41 Kcal mol for 2,4-D and chlorpyrifos, respectively. Molecular Mechanics Poisson-Boltzmann Surface Area (MM/PBSA) analysis through 250 ns of molecular dynamics revealed stronger hydrophobic interactions of laccase with chlorpyrifos and highlighted the importance of residue His460 in stabilizing both complexes. Understanding the impact of these agrochemicals on the catalytic function of laccase is crucial for developing future biotechnological strategies involving this enzyme.
白腐真菌(WRF)分泌的酶,如漆酶,为处理有害的外源性化合物提供了一种很有前景的方法。本研究通过体外和生物信息学分析,全面分析了农药2,4-二氯苯氧乙酸(2,4-D)和毒死蜱对BAFC 633漆酶的影响。结果表明,该真菌菌株对这两种农药均具有耐受性,其菌丝体在形态和超微结构上有明显改变。在所有初始处理中均检测到漆酶活性和两种同工酶(53和70 kDa)。在两种农药存在的情况下,对漆酶进行浓缩以进行后续催化评估,结果表明其在pH为3.6和温度范围为50-60°C时具有高稳定性。对与该漆酶对应的基因进行了建模,其结构显示有一个确定的催化口袋,药物评分为0.61。分子对接估计2,4-D和毒死蜱的亲和能分别为-5.06和-9.41千卡/摩尔。通过250纳秒的分子动力学进行的分子力学泊松-玻尔兹曼表面积(MM/PBSA)分析表明,漆酶与毒死蜱之间的疏水相互作用更强,并突出了His460残基在稳定两种复合物中的重要性。了解这些农用化学品对漆酶催化功能的影响对于开发未来涉及该酶的生物技术策略至关重要。