Petukhova Natalia, Poluzerova Anastasia, Bug Dmitry, Nerubenko Elena, Kostareva Anna, Tsoy Uliana, Dmitrieva Renata
Bioinformatics Research Center, Pavlov First Saint Petersburg Medical State University, 197022 Saint Petersburg, Russia.
School of Natural Sciences, Tyumen State University, 625003 Tyumen, Russia.
Int J Mol Sci. 2024 Nov 26;25(23):12697. doi: 10.3390/ijms252312697.
The adenomas in Cushing's disease frequently exhibit mutations in exon 14, within a binding motif for the regulatory protein 14-3-3 located between the catalytic domain (DUB), responsible for ubiquitin hydrolysis, and the WW-like domain that mediates autoinhibition, resulting in constantly active USP8. The exact molecular mechanism of deubiquitinase activity disruption in Cushing's disease remains unclear. To address this, Sanger sequencing of was performed to identify mutations in corticotropinomas. These mutations were subjected to computational screening, followed by molecular dynamics simulations to assess the structural alterations that might change the biological activity of USP8. Eight different variants of the gene were identified both within and outside the "hotspot" region. Six of these had previously been reported in Cushing's disease, while two were detected for the first time in our patients with CD. One of the two new variants, initially classified as benign during screening, was found in the neighboring SH3 binding motif at a distance of 20 amino acids. This variant demonstrated pathogenicity patterns similar to those of known pathogenic variants. All variants identified in our patients caused conformational changes in the USP8 protein in a similar manner. The identified mutations, despite differences in annotation results-including evolutionary conservation assessments, automated predictor data, and variations in localization within exon 14-exhibit similar patterns of protein conformational change. This suggests a pathogenic effect that contributes to the development of CD.
库欣病中的腺瘤经常在外显子14中出现突变,该区域位于负责泛素水解的催化结构域(DUB)和介导自抑制的类WW结构域之间的调节蛋白14-3-3的结合基序内,导致USP8持续激活。库欣病中去泛素酶活性破坏的确切分子机制仍不清楚。为了解决这个问题,对促肾上腺皮质激素腺瘤进行了桑格测序以鉴定突变。对这些突变进行计算筛选,然后进行分子动力学模拟,以评估可能改变USP8生物学活性的结构改变。在“热点”区域内外共鉴定出8种不同的 基因变体。其中6种先前已在库欣病中报道,而另外2种是在我们的库欣病患者中首次检测到的。两个新变体中的一个,在筛选期间最初被归类为良性,位于距离20个氨基酸的相邻SH3结合基序中。该变体表现出与已知致病变体相似的致病模式。我们患者中鉴定出的所有 变体均以类似方式导致USP8蛋白的构象变化。尽管注释结果存在差异,包括进化保守性评估、自动预测数据以及外显子14内定位的变化,但鉴定出的突变仍表现出相似的蛋白质构象变化模式。这表明存在一种致病作用,促成了库欣病的发展。