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基于微流控芯片的气溶胶中耻垢分枝杆菌定量检测的富集及核酸提取

Microfluidic Chip-based Enrichment and Nucleic Acid Extraction for Quantitative Detection of Mycobacterium Smegmatis in Aerosols.

作者信息

Cheng Jie, Nie Minhan, An Yiwei, Chen Zuanguang, Tong Yanli

机构信息

School of Pharmaceutical Sciences, Sun Yat-Sen University, Guangzhou, 510006, China.

School of Pharmacy, Guangdong Medical University, Dongguan, 523808, China.

出版信息

Curr Microbiol. 2024 Dec 17;82(1):42. doi: 10.1007/s00284-024-04027-7.

Abstract

Tuberculosis (TB) is ranked as the third most prevalent infectious disease globally. Early detection and treatment are crucial for effective management. Conventional diagnostic methods primarily rely on sputum samples, which present challenges in accessibility and have limited accuracy in certain populations such as children, individuals with HIV, and those with extrapulmonary TB. To address the need for point-of-care diagnostics, this study introduces a rapid diagnostic approach for TB using exhaled breath aerosol as a more easily obtainable specimen. Mycobacterium smegmatis, a non-pathogenic bacterium genetically similar to Mycobacterium tuberculosis, is used as a surrogate organism. The method involves the use of microfluidic chips for concentrating and electrolyzing mycobacteria in the aerosol, followed by extracting and quantifying nucleic acids using real-time fluorescence quantitative PCR. Notably, successful enrichment and quantification of bacterial content were achieved even at a minimal bacterial aerosol concentration of 10 CFU/mL. The developed chips are characterized by their cost-effectiveness, ease of use, high bacterial enrichment, efficient nucleic acid extraction, and low detection threshold (4.4 × 10 mol/L). This innovative approach offers a promising method for early TB screening and opens avenues for the rapid identification of other aerosol-transmitted diseases.

摘要

结核病(TB)是全球第三大最普遍的传染病。早期检测和治疗对于有效管理至关重要。传统的诊断方法主要依赖痰液样本,这在获取样本方面存在挑战,并且在某些人群(如儿童、艾滋病毒感染者和肺外结核病患者)中准确性有限。为满足即时诊断的需求,本研究引入了一种使用呼出的呼吸气溶胶作为更易获取样本的结核病快速诊断方法。耻垢分枝杆菌是一种在基因上与结核分枝杆菌相似的非致病性细菌,被用作替代生物体。该方法涉及使用微流控芯片来浓缩和电解气溶胶中的分枝杆菌,然后使用实时荧光定量PCR提取和定量核酸。值得注意的是,即使在最低细菌气溶胶浓度为10 CFU/mL的情况下,也成功实现了细菌含量的富集和定量。所开发的芯片具有成本效益高、使用方便、细菌富集率高、核酸提取效率高和检测阈值低(4.4×10 mol/L)的特点。这种创新方法为早期结核病筛查提供了一种有前景的方法,并为快速识别其他气溶胶传播疾病开辟了途径。

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